Information for 9-AACCTCTTCACTC (Motif 23)

G T C A C T G A A T G C A T G C A C G T A G T C A C G T G A C T A G T C C G T A A G T C A C G T G T A C
Reverse Opposite:
A C T G C G T A A C T G A C G T C T A G C T G A C G T A A C T G C G T A A T C G A T C G G A C T A C G T
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.839
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.9 +/- 19.1bp
Average Position of motif in Background47.0 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AACCTCTTCACTC
-NSCACTYVAV--
 G T C A C T G A A T G C A T G C A C G T A G T C A C G T G A C T A G T C C G T A A G T C A C G T G T A C
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACCTCTTCACTC
-RSCACTYRAG--
 G T C A C T G A A T G C A T G C A C G T A G T C A C G T G A C T A G T C C G T A A G T C A C G T G T A C
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AACCTCTTCACTC
AASCACTCAA---
 G T C A C T G A A T G C A T G C A C G T A G T C A C G T G A C T A G T C C G T A A G T C A C G T G T A C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AACCTCTTCACTC
-----ATCCAC--
 G T C A C T G A A T G C A T G C A C G T A G T C A C G T G A C T A G T C C G T A A G T C A C G T G T A C
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AACCTCTTCACTC--
-----MRSCACTYAA
 G T C A C T G A A T G C A T G C A C G T A G T C A C G T G A C T A G T C C G T A A G T C A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AACCTCTTCACTC-
TAAGCCACTTGAAATT
 A C G T A C G T G T C A C T G A A T G C A T G C A C G T A G T C A C G T G A C T A G T C C G T A A G T C A C G T G T A C A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AACCTCTTCACTC--------
-GCCTCCTCCMTCWGACTGKS
 G T C A C T G A A T G C A T G C A C G T A G T C A C G T G A C T A G T C C G T A A G T C A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AACCTCTTCACTC
----GCTTCC---
 G T C A C T G A A T G C A T G C A C G T A G T C A C G T G A C T A G T C C G T A A G T C A C G T G T A C
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AACCTCTTCACTC-
--CNTGTTTACATA
 G T C A C T G A A T G C A T G C A C G T A G T C A C G T G A C T A G T C C G T A A G T C A C G T G T A C A C G T
A C G T A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AACCTCTTCACTC---
-----CTTCACACCTA
 G T C A C T G A A T G C A T G C A C G T A G T C A C G T G A C T A G T C C G T A A G T C A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A