Information for 1-WCYRCACCACTAR (Motif 2)

C G T A A G T C A G C T C T G A G T A C C G T A A G T C A G T C C G T A A G T C C G A T C G T A C T G A
Reverse Opposite:
A G C T A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C T G A G C T C T G A A C T G C G A T
p-value:1e-13
log p-value:-3.167e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.3 +/- 16.7bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:WCYRCACCACTAR
----ATCCAC---
 C G T A A G T C A G C T C T G A G T A C C G T A A G T C A G T C C G T A A G T C C G A T C G T A C T G A
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:WCYRCACCACTAR-
-----ACCACTTAA
 C G T A A G T C A G C T C T G A G T A C C G T A A G T C A G T C C G T A A G T C C G A T C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:WCYRCACCACTAR-
----MRSCACTYAA
 C G T A A G T C A G C T C T G A G T A C C G T A A G T C A G T C C G T A A G T C C G A T C G T A C T G A A C G T
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:WCYRCACCACTAR--
-----ACCACTTGAA
 C G T A A G T C A G C T C T G A G T A C C G T A A G T C A G T C C G T A A G T C C G A T C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:WCYRCACCACTAR-
--NWAACCACADNN
 C G T A A G T C A G C T C T G A G T A C C G T A A G T C A G T C C G T A A G T C C G A T C G T A C T G A A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:WCYRCACCACTAR-
-----ACCACTTAA
 C G T A A G T C A G C T C T G A G T A C C G T A A G T C A G T C C G T A A G T C C G A T C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:WCYRCACCACTAR-----
-CTTAACCACTTAAGGAT
 C G T A A G T C A G C T C T G A G T A C C G T A A G T C A G T C C G T A A G T C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:WCYRCACCACTAR-----
-CATAACCACTTAACAAC
 C G T A A G T C A G C T C T G A G T A C C G T A A G T C A G T C C G T A A G T C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:WCYRCACCACTAR
---AAACCGCAAA
 C G T A A G T C A G C T C T G A G T A C C G T A A G T C A G T C C G T A A G T C C G A T C G T A C T G A
A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:WCYRCACCACTAR
---AAACCACANN
 C G T A A G T C A G C T C T G A G T A C C G T A A G T C A G T C C G T A A G T C C G A T C G T A C T G A
A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A