Information for 10-CATTGTCTTCAGGTGH (Motif 14)

T G A C G T C A A G C T A C G T A C T G A C G T A G T C C G A T A C G T A G T C C G T A A C T G T A C G G A C T A C T G G C T A
Reverse Opposite:
C A G T A G T C C T G A A T G C G T A C A C G T A C T G C G T A C G T A C T A G C G T A G T A C G T C A C T G A A C G T A C T G
p-value:1e-11
log p-value:-2.569e+01
Information Content per bp:1.792
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.6 +/- 27.3bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCTTCAGGTGH
CCATTGTTTT-------
 A C G T T G A C G T C A A G C T A C G T A C T G A C G T A G T C C G A T A C G T A G T C C G T A A C T G T A C G G A C T A C T G G C T A
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCTTCAGGTGH
CCATTGTATGCAAAT--
 A C G T T G A C G T C A A G C T A C G T A C T G A C G T A G T C C G A T A C G T A G T C C G T A A C T G T A C G G A C T A C T G G C T A
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CATTGTCTTCAGGTGH-
-------NNCAGGTGNN
 T G A C G T C A A G C T A C G T A C T G A C G T A G T C C G A T A C G T A G T C C G T A A C T G T A C G G A C T A C T G G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATTGTCTTCAGGTGH
YTAATTRAWWCCAGATGT
 A C G T A C G T T G A C G T C A A G C T A C G T A C T G A C G T A G T C C G A T A C G T A G T C C G T A A C T G T A C G G A C T A C T G G C T A
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CATTGTCTTCAGGTGH
-ATTGTTTAN------
 T G A C G T C A A G C T A C G T A C T G A C G T A G T C C G A T A C G T A G T C C G T A A C T G T A C G G A C T A C T G G C T A
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CATTGTCTTCAGGTGH-----
----ATCCACAGGTGCGAAAA
 T G A C G T C A A G C T A C G T A C T G A C G T A G T C C G A T A C G T A G T C C G T A A C T G T A C G G A C T A C T G G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCTTCAGGTGH
TAATTGTTCTAAAC---
 A C G T T G A C G T C A A G C T A C G T A C T G A C G T A G T C C G A T A C G T A G T C C G T A A C T G T A C G G A C T A C T G G C T A
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CATTGTCTTCAGGTGH
TTCAATTGTTCTAAAA---
 A C G T A C G T A C G T T G A C G T C A A G C T A C G T A C T G A C G T A G T C C G A T A C G T A G T C C G T A A C T G T A C G G A C T A C T G G C T A
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:CATTGTCTTCAGGTGH--
---------CAGGTGAGG
 T G A C G T C A A G C T A C G T A C T G A C G T A G T C C G A T A C G T A G T C C G T A A C T G T A C G G A C T A C T G G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CATTGTCTTCAGGTGH-
-------NNCAGGTGTN
 T G A C G T C A A G C T A C G T A C T G A C G T A G T C C G A T A C G T A G T C C G T A A C T G T A C G G A C T A C T G G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T