Information for 15-CCTGCCGGGCGCGGGR (Motif 26)

A G T C G T A C A G C T C T A G A T G C T A G C C T A G A C T G A C T G T A G C A T C G A G T C A C T G A C T G C A T G C T G A
Reverse Opposite:
A G C T G T A C G T A C G T A C T C A G A T G C A C T G G T A C G T A C A G T C A C T G A T C G A G T C C T G A C A T G A C T G
p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.706
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif19.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.9 +/- 23.9bp
Average Position of motif in Background43.3 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCCGGGCGCGGGR
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A T G C T A G C C T A G A C T G A C T G T A G C A T C G A G T C A C T G A C T G C A T G C T G A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCCGGGCGCGGGR
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A G T C G T A C A G C T C T A G A T G C T A G C C T A G A C T G A C T G T A G C A T C G A G T C A C T G A C T G C A T G C T G A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCCGGGCGCGGGR
CCCCCTGCTGTG-------
 A C G T A C G T A C G T A G T C G T A C A G C T C T A G A T G C T A G C C T A G A C T G A C T G T A G C A T C G A G T C A C T G A C T G C A T G C T G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTGCCGGGCGCGGGR
CCTGCTGAGH------
 A G T C G T A C A G C T C T A G A T G C T A G C C T A G A C T G A C T G T A G C A T C G A G T C A C T G A C T G C A T G C T G A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCCGGGCGCGGGR
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A G T C G T A C A G C T C T A G A T G C T A G C C T A G A C T G A C T G T A G C A T C G A G T C A C T G A C T G C A T G C T G A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCCGGGCGCGGGR
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A G T C G T A C A G C T C T A G A T G C T A G C C T A G A C T G A C T G T A G C A T C G A G T C A C T G A C T G C A T G C T G A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCTGCCGGGCGCGGGR-
---GGCGGGGGCGGGGG
 A G T C G T A C A G C T C T A G A T G C T A G C C T A G A C T G A C T G T A G C A T C G A G T C A C T G A C T G C A T G C T G A A C G T
A C G T A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCCGGGCGCGGGR---
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C G T A C A G C T C T A G A T G C T A G C C T A G A C T G A C T G T A G C A T C G A G T C A C T G A C T G C A T G C T G A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCTGCCGGGCGCGGGR-
--GGGNGGGGGCGGGGC
 A G T C G T A C A G C T C T A G A T G C T A G C C T A G A C T G A C T G T A G C A T C G A G T C A C T G A C T G C A T G C T G A A C G T
A C G T A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCTGCCGGGCGCGGGR-
------GGGGGCGGGGC
 A G T C G T A C A G C T C T A G A T G C T A G C C T A G A C T G A C T G T A G C A T C G A G T C A C T G A C T G C A T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C