Information for 14-AGRCTWGGGCTTATAA (Motif 22)

C G T A C A T G C T G A A G T C A G C T C G A T C T A G A C T G A C T G G T A C A G C T A G C T C G T A G A C T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A G A C T C T G A C T G A C A T G A G T C A G T C A G T C C G T A C T G A A C T G A G C T G A T C C G A T
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.740
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 13.8bp
Average Position of motif in Background65.3 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGRCTWGGGCTTATAA
-----NGGGATTA---
 C G T A C A T G C T G A A G T C A G C T C G A T C T A G A C T G A C T G G T A C A G C T A G C T C G T A G A C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGRCTWGGGCTTATAA
------NGGATTAN--
 C G T A C A T G C T G A A G T C A G C T C G A T C T A G A C T G A C T G G T A C A G C T A G C T C G T A G A C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGRCTWGGGCTTATAA
--GCTCGGSCTC----
 C G T A C A T G C T G A A G T C A G C T C G A T C T A G A C T G A C T G G T A C A G C T A G C T C G T A G A C T C G T A C G T A
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGRCTWGGGCTTATAA--
-NNNTNGGGCGTATNNTN
 C G T A C A T G C T G A A G T C A G C T C G A T C T A G A C T G A C T G G T A C A G C T A G C T C G T A G A C T C G T A C G T A A C G T A C G T
A C G T G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGRCTWGGGCTTATAA
ATGCCCGGGCATGT--
 C G T A C A T G C T G A A G T C A G C T C G A T C T A G A C T G A C T G G T A C A G C T A G C T C G T A G A C T C G T A C G T A
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGRCTWGGGCTTATAA
TGCCTGAGGCN-----
 C G T A C A T G C T G A A G T C A G C T C G A T C T A G A C T G A C T G G T A C A G C T A G C T C G T A G A C T C G T A C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGRCTWGGGCTTATAA
------CGGTTTCAAA
 C G T A C A T G C T G A A G T C A G C T C G A T C T A G A C T G A C T G G T A C A G C T A G C T C G T A G A C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGRCTWGGGCTTATAA
NGCCTNAGGCN-----
 C G T A C A T G C T G A A G T C A G C T C G A T C T A G A C T G A C T G G T A C A G C T A G C T C G T A G A C T C G T A C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGRCTWGGGCTTATAA--
-TTAGAGGGATTAACAAT
 C G T A C A T G C T G A A G T C A G C T C G A T C T A G A C T G A C T G G T A C A G C T A G C T C G T A G A C T C G T A C G T A A C G T A C G T
A C G T G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AGRCTWGGGCTTATAA
------GGGATTAA--
 C G T A C A T G C T G A A G T C A G C T C G A T C T A G A C T G A C T G G T A C A G C T A G C T C G T A G A C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T