Information for 13-GDTTTCCAGAATAATC (Motif 21)

A C T G C A G T A C G T A G C T A G C T A T G C A G T C C G T A C T A G C G T A C G T A A G C T C G T A C G T A A C G T A T G C
Reverse Opposite:
A T C G C G T A A C G T A C G T C T G A A C G T A C G T A G T C G C A T A C T G A T C G C T G A C T G A C G T A G C T A G T A C
p-value:1e-9
log p-value:-2.215e+01
Information Content per bp:1.811
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.6 +/- 29.6bp
Average Position of motif in Background31.4 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GDTTTCCAGAATAATC
-ATTTGCATAACAATG
 A C T G C A G T A C G T A G C T A G C T A T G C A G T C C G T A C T A G C G T A C G T A A G C T C G T A C G T A A C G T A T G C
A C G T G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GDTTTCCAGAATAATC
-ATTTGCATAACAAAG
 A C T G C A G T A C G T A G C T A G C T A T G C A G T C C G T A C T A G C G T A C G T A A G C T C G T A C G T A A C G T A T G C
A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

PB0074.1_Sox8_1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GDTTTCCAGAATAATC-----
----TNNAGAACAATANATNN
 A C T G C A G T A C G T A G C T A G C T A T G C A G T C C G T A C T A G C G T A C G T A A G C T C G T A C G T A A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:GDTTTCCAGAATAATC
--------NAACAAT-
 A C T G C A G T A C G T A G C T A G C T A T G C A G T C C G T A C T A G C G T A C G T A A G C T C G T A C G T A A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GDTTTCCAGAATAATC
---TTCTAGAACGTTC
 A C T G C A G T A C G T A G C T A G C T A T G C A G T C C G T A C T A G C G T A C G T A A G C T C G T A C G T A A C G T A T G C
A C G T A C G T A C G T C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

HSF2/MA0770.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GDTTTCCAGAATAATC
---TTCTAGAACGTTC
 A C T G C A G T A C G T A G C T A G C T A T G C A G T C C G T A C T A G C G T A C G T A A G C T C G T A C G T A A C G T A T G C
A C G T A C G T A C G T C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.61
Offset:9
Orientation:reverse strand
Alignment:GDTTTCCAGAATAATC
---------AACAAT-
 A C T G C A G T A C G T A G C T A G C T A T G C A G T C C G T A C T A G C G T A C G T A A G C T C G T A C G T A A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GDTTTCCAGAATAATC
---TTCTAGAACGTTC
 A C T G C A G T A C G T A G C T A G C T A T G C A G T C C G T A C T A G C G T A C G T A A G C T C G T A C G T A A C G T A T G C
A C G T A C G T A C G T C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GDTTTCCAGAATAATC---
---NNTNANAACAATTNNA
 A C T G C A G T A C G T A G C T A G C T A T G C A G T C C G T A C T A G C G T A C G T A A G C T C G T A C G T A A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GDTTTCCAGAATAATC
CAATTGCAAAAATAT-
 A C T G C A G T A C G T A G C T A G C T A T G C A G T C C G T A C T A G C G T A C G T A A G C T C G T A C G T A A C G T A T G C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T