Information for 10-CTMTTTTCWCKKG (Motif 20)

A G T C A C G T G T C A A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A G T A C C T A G C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C T G
p-value:1e-9
log p-value:-2.215e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.4 +/- 29.2bp
Average Position of motif in Background18.9 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTMTTTTCWCKKG--
-TTTTTTTTCNNGTN
 A G T C A C G T G T C A A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A C T G A C G T A C G T
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTMTTTTCWCKKG
CTATTTTTGG---
 A G T C A C G T G T C A A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A C T G
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTMTTTTCWCKKG-
--ACTTTCACTTTC
 A G T C A C G T G T C A A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A C T G A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTMTTTTCWCKKG--
---TTTTCGCGCGAA
 A G T C A C G T G T C A A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

Foxo1/MA0480.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTMTTTTCWCKKG
TCCTGTTTACA----
 A C G T A C G T A G T C A C G T G T C A A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A C T G
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTMTTTTCWCKKG
-TGTTTACTTAGG
 A G T C A C G T G T C A A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A C T G
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTMTTTTCWCKKG---
NSTGTTTRCWCAGBNNN
 A C G T A G T C A C G T G T C A A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A C T G A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTMTTTTCWCKKG
KCTATTTTTRGH--
 A C G T A G T C A C G T G T C A A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A C T G
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTMTTTTCWCKKG
BSNTGTTTACWYWGN
 A C G T A C G T A G T C A C G T G T C A A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A C T G
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTMTTTTCWCKKG
-TCTTATCTCCC-
 A G T C A C G T G T C A A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C T G A C G T A C T G
A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T