Information for 9-CTGGATGGCG (Motif 31)

A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G T C C G T A A C G T A G T C A G T C C G T A A C T G
p-value:1e-1
log p-value:-4.385e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 25.3bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTGGATGGCG---
--TAATGGCGGNC
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGGATGGCG--
CAAGATGGCGGC
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Atf3/MA0605.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTGGATGGCG-
---GATGACGT
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T
A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGGATGGCG-------
NAGANTGGCGGGGNGNA
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGGATGGCG--
CAAGATGGCGGC
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGGATGGCG----
NGTAGGTTGGCATNNN
 A C G T A C G T A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0108.1_Atf1_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGGATGGCG------
--GAATGACGAATAAC
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGGATGGCG
GTTAATGGCC
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTGGATGGCG-
--GGTTGGCAT
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTGGATGGCG
GGTCTGGCAT---
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T