Information for 13-ACAGCCCTGGAGGGTA (Motif 27)

T G C A A T G C C T G A A C T G A T G C A T G C A G T C C G A T A C T G C A T G T C G A A C T G A T C G T A C G A C G T T C G A
Reverse Opposite:
A G C T T G C A A T G C A T G C G T A C A G C T G T A C A G T C C G T A C T A G T A C G A T C G A G T C A G C T A T C G A C G T
p-value:1e-7
log p-value:-1.641e+01
Information Content per bp:1.684
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.7 +/- 27.4bp
Average Position of motif in Background60.5 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACAGCCCTGGAGGGTA
--TGCCCTGAGGGCA-
 T G C A A T G C C T G A A C T G A T G C A T G C A G T C C G A T A C T G C A T G T C G A A C T G A T C G T A C G A C G T T C G A
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACAGCCCTGGAGGGTA
--TGCCCTGAGGGCA-
 T G C A A T G C C T G A A C T G A T G C A T G C A G T C C G A T A C T G C A T G T C G A A C T G A T C G T A C G A C G T T C G A
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACAGCCCTGGAGGGTA
--TGCCCTGAGGGCA-
 T G C A A T G C C T G A A C T G A T G C A T G C A G T C C G A T A C T G C A T G T C G A A C T G A T C G T A C G A C G T T C G A
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACAGCCCTGGAGGGTA
--AGGCCTNG------
 T G C A A T G C C T G A A C T G A T G C A T G C A G T C C G A T A C T G C A T G T C G A A C T G A T C G T A C G A C G T T C G A
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACAGCCCTGGAGGGTA
-CAGCC----------
 T G C A A T G C C T G A A C T G A T G C A T G C A G T C C G A T A C T G C A T G T C G A A C T G A T C G T A C G A C G T T C G A
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ACAGCCCTGGAGGGTA--
---DCHCAGCAGGRGGCC
 T G C A A T G C C T G A A C T G A T G C A T G C A G T C C G A T A C T G C A T G T C G A A C T G A T C G T A C G A C G T T C G A A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCCCTGGAGGGTA
CACAGN-----------
 A C G T T G C A A T G C C T G A A C T G A T G C A T G C A G T C C G A T A C T G C A T G T C G A A C T G A T C G T A C G A C G T T C G A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACAGCCCTGGAGGGTA
-CCACACAGCAGGAGA
 T G C A A T G C C T G A A C T G A T G C A T G C A G T C C G A T A C T G C A T G T C G A A C T G A T C G T A C G A C G T T C G A
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACAGCCCTGGAGGGTA
-ATGCCCTGAGGC---
 T G C A A T G C C T G A A C T G A T G C A T G C A G T C C G A T A C T G C A T G T C G A A C T G A T C G T A C G A C G T T C G A
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ACAGCCCTGGAGGGTA
--TGCCCAGNHW----
 T G C A A T G C C T G A A C T G A T G C A T G C A G T C C G A T A C T G C A T G T C G A A C T G A T C G T A C G A C G T T C G A
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T