p-value: | 1e-9 |
log p-value: | -2.100e+01 |
Information Content per bp: | 1.847 |
Number of Target Sequences with motif | 13.0 |
Percentage of Target Sequences with motif | 2.10% |
Number of Background Sequences with motif | 99.2 |
Percentage of Background Sequences with motif | 0.20% |
Average Position of motif in Targets | 41.8 +/- 24.2bp |
Average Position of motif in Background | 50.9 +/- 26.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NKX2-3/MA0672.1/Jaspar
Match Rank: | 1 |
Score: | 0.81 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCACTTGAGG ACCACTTGAA- |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 2 |
Score: | 0.81 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCACTTGAGG CCACTTGAA- |
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PH0111.1_Nkx2-2/Jaspar
Match Rank: | 3 |
Score: | 0.80 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCACTTGAGG--- ATAACCACTTGAAAATT |
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PH0171.1_Nkx2-1/Jaspar
Match Rank: | 4 |
Score: | 0.75 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCACTTGAGG-- TAAGCCACTTGAAATT |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 5 |
Score: | 0.74 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCACTTGAGG-- TAAGCCACTTGAATTT |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 6 |
Score: | 0.73 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCACTTGAGG NSCACTYVAV- |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 7 |
Score: | 0.73 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCACTTGAGG RSCACTYRAG- |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 8 |
Score: | 0.71 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCACTTGAGG-- TAAGCCACTTGAAATT |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 9 |
Score: | 0.69 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCACTTGAGG-- CTTAACCACTTAAGGAT |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 10 |
Score: | 0.69 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCACTTGAGG-- TAAGCCACTTAACATT |
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