Information for 1-TCCAVCCTTCATATCT (Motif 1)

A C G T G A T C A G T C C G T A T A C G G T A C G T A C C G A T A C G T A T G C G T C A G A C T C G T A A C G T A G T C C G A T
Reverse Opposite:
C G T A C T A G G T C A C G A T C G T A A C G T A T C G T C G A C G T A A C T G A C T G A T G C A C G T C T A G C A T G C G T A
p-value:1e-14
log p-value:-3.425e+01
Information Content per bp:1.707
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.7 +/- 24.4bp
Average Position of motif in Background39.1 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TCCAVCCTTCATATCT
ATCCAC-----------
 A C G T A C G T G A T C A G T C C G T A T A C G G T A C G T A C C G A T A C G T A T G C G T C A G A C T C G T A A C G T A G T C C G A T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:TCCAVCCTTCATATCT-----
----NNNCTGATATCTCNNNN
 A C G T G A T C A G T C C G T A T A C G G T A C G T A C C G A T A C G T A T G C G T C A G A C T C G T A A C G T A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Gata1/MA0035.3/Jaspar

Match Rank:3
Score:0.48
Offset:7
Orientation:forward strand
Alignment:TCCAVCCTTCATATCT--
-------TTCTTATCTGT
 A C G T G A T C A G T C C G T A T A C G G T A C G T A C C G A T A C G T A T G C G T C A G A C T C G T A A C G T A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TCCAVCCTTCATATCT
ATGCATWATGCATRW--
 A C G T A C G T G A T C A G T C C G T A T A C G G T A C G T A C C G A T A C G T A T G C G T C A G A C T C G T A A C G T A G T C C G A T
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:TCCAVCCTTCATATCT-
TNNATTATGCATANNTT
 A C G T G A T C A G T C C G T A T A C G G T A C G T A C C G A T A C G T A T G C G T C A G A C T C G T A A C G T A G T C C G A T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:TCCAVCCTTCATATCT
-BCAGACWA-------
 A C G T G A T C A G T C C G T A T A C G G T A C G T A C C G A T A C G T A T G C G T C A G A C T C G T A A C G T A G T C C G A T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.47
Offset:1
Orientation:forward strand
Alignment:TCCAVCCTTCATATCT
-CCATCAATCAAA---
 A C G T G A T C A G T C C G T A T A C G G T A C G T A C C G A T A C G T A T G C G T C A G A C T C G T A A C G T A G T C C G A T
A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.47
Offset:1
Orientation:forward strand
Alignment:TCCAVCCTTCATATCT
-TCAGTCTT-------
 A C G T G A T C A G T C C G T A T A C G G T A C G T A C C G A T A C G T A T G C G T C A G A C T C G T A A C G T A G T C C G A T
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:9
Score:0.46
Offset:0
Orientation:forward strand
Alignment:TCCAVCCTTCATATCT
TTCACGCATGAGTT--
 A C G T G A T C A G T C C G T A T A C G G T A C G T A C C G A T A C G T A T G C G T C A G A C T C G T A A C G T A G T C C G A T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:10
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---TCCAVCCTTCATATCT
CCTTCCTTCCTTCCTTCC-
 A C G T A C G T A C G T A C G T G A T C A G T C C G T A T A C G G T A C G T A C C G A T A C G T A T G C G T C A G A C T C G T A A C G T A G T C C G A T
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C A C G T