Information for 2-CCTCCAGGGCACACAC (Motif 3)

A G T C G T A C A C G T A G T C A G T C G T C A T C A G T A C G A C T G A G T C C G T A A G T C C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A C T G A C G T A C T G A G T C A T G C A G T C A C G T C T A G C T A G G T C A A C T G C T A G
p-value:1e-13
log p-value:-3.045e+01
Information Content per bp:1.822
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 33.2bp
Average Position of motif in Background31.2 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.78
Offset:4
Orientation:forward strand
Alignment:CCTCCAGGGCACACAC----
----AGCGGCACACACGCAA
 A G T C G T A C A C G T A G T C A G T C G T C A T C A G T A C G A C T G A G T C C G T A A G T C C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:forward strand
Alignment:CCTCCAGGGCACACAC----
----CGAAGCACACAAAATA
 A G T C G T A C A C G T A G T C A G T C G T C A T C A G T A C G A C T G A G T C C G T A A G T C C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTCCAGGGCACACAC-
NNNVCTGWGYAAACASN
 A G T C G T A C A C G T A G T C A G T C G T C A T C A G T A C G A C T G A G T C C G T A A G T C C G T A A G T C C G T A A G T C A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCTCCAGGGCACACAC
----CCAGGAACAG--
 A G T C G T A C A C G T A G T C A G T C G T C A T C A G T A C G A C T G A G T C C G T A A G T C C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CCTCCAGGGCACACAC-
-----RGGGCACTAACY
 A G T C G T A C A C G T A G T C A G T C G T C A T C A G T A C G A C T G A G T C C G T A A G T C C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CCTCCAGGGCACACAC--
------GGCCACACCCAN
 A G T C G T A C A C G T A G T C A G T C G T C A T C A G T A C G A C T G A G T C C G T A A G T C C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CCTCCAGGGCACACAC--
------GGACACACCCCC
 A G T C G T A C A C G T A G T C A G T C G T C A T C A G T A C G A C T G A G T C C G T A A G T C C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTCCAGGGCACACAC
NNNNTTGGGCACNNCN
 A G T C G T A C A C G T A G T C A G T C G T C A T C A G T A C G A C T G A G T C C G T A A G T C C G T A A G T C C G T A A G T C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCTCCAGGGCACACAC-
------GGCCACACCCA
 A G T C G T A C A C G T A G T C A G T C G T C A T C A G T A C G A C T G A G T C C G T A A G T C C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCTCCAGGGCACACAC--
-CAGATGTGCACATACGT
 A G T C G T A C A C G T A G T C A G T C G T C A T C A G T A C G A C T G A G T C C G T A A G T C C G T A A G T C C G T A A G T C A C G T A C G T
A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T