Information for 9-GAGCCCTGCACWCACC (Motif 21)

A C T G C G T A A T C G T G A C A G T C A G T C A C G T A C T G A T G C C G T A A T G C C G T A A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G C G A T A T C G A C G T A T C G A G T C C G T A A C T G A C T G A C T G A T G C A C G T A G T C
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.1 +/- 22.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAGCCCTGCACWCACC---
---AGCGGCACACACGCAA
 A C T G C G T A A T C G T G A C A G T C A G T C A C G T A C T G A T G C C G T A A T G C C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GAGCCCTGCACWCACC---
-------GGACACACCCCC
 A C T G C G T A A T C G T G A C A G T C A G T C A C G T A C T G A T G C C G T A A T G C C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGCCCTGCACWCACC-
-TGACCTNTAGTAACCC
 A C T G C G T A A T C G T G A C A G T C A G T C A C G T A C T G A T G C C G T A A T G C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGCCCTGCACWCACC
-AGGCCTNG-------
 A C T G C G T A A T C G T G A C A G T C A G T C A C G T A C T G A T G C C G T A A T G C C G T A A G T C C G T A A G T C A G T C
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GAGCCCTGCACWCACC--
-------NNACTTACCTN
 A C T G C G T A A T C G T G A C A G T C A G T C A C G T A C T G A T G C C G T A A T G C C G T A A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GAGCCCTGCACWCACC
NNNNTTGACCCCTNNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T C G T G A C A G T C A G T C A C G T A C T G A T G C C G T A A T G C C G T A A G T C C G T A A G T C A G T C
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T A C G T A C G T A C G T A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GAGCCCTGCACWCACC----
-TGACCTAAAGTAACCTCTG
 A C T G C G T A A T C G T G A C A G T C A G T C A C G T A C T G A T G C C G T A A T G C C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCCCTGCACWCACC
NNNNTGAGCACTGTNNG----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T C G T G A C A G T C A G T C A C G T A C T G A T G C C G T A A T G C C G T A A G T C C G T A A G T C A G T C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GAGCCCTGCACWCACC
-TGWCCTCARNTGACC
 A C T G C G T A A T C G T G A C A G T C A G T C A C G T A C T G A T G C C G T A A T G C C G T A A G T C C G T A A G T C A G T C
A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GAGCCCTGCACWCACC
AATCGCACTGCATTCCG-
 A C G T A C G T A C T G C G T A A T C G T G A C A G T C A G T C A C G T A C T G A T G C C G T A A T G C C G T A A G T C C G T A A G T C A G T C
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T