Information for 3-TAGCACATGT (Motif 6)

A G C T C G T A T A C G T G A C G T C A T A G C T C G A G C A T T C A G A C G T
Reverse Opposite:
T G C A A G T C C G T A A G C T A T C G A C G T A C T G A G T C G C A T T C G A
p-value:1e-11
log p-value:-2.648e+01
Information Content per bp:1.672
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.07%
Number of Background Sequences with motif262.8
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets45.9 +/- 23.4bp
Average Position of motif in Background48.7 +/- 38.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TAGCACATGT
AAGCACATGG
 A G C T C G T A T A C G T G A C G T C A T A G C T C G A G C A T T C A G A C G T
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

Npas2/MA0626.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TAGCACATGT-
-GGCACGTGTC
 A G C T C G T A T A C G T G A C G T C A T A G C T C G A G C A T T C A G A C G T A C G T
A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

PH0086.1_Irx5/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAGCACATGT-----
ANTNNTACATGTANNTN
 A C G T A C G T A G C T C G T A T A C G T G A C G T C A T A G C T C G A G C A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TAGCACATGT----
NNTNCGCACCTGTNGAN
 A C G T A C G T A C G T A G C T C G T A T A C G T G A C G T C A T A G C T C G A G C A T T C A G A C G T A C G T A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAGCACATGT-----
ANTATTACATGTANNNN
 A C G T A C G T A G C T C G T A T A C G T G A C G T C A T A G C T C G A G C A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TAGCACATGT
--GCACGTGT
 A G C T C G T A T A C G T G A C G T C A T A G C T C G A G C A T T C A G A C G T
A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TAGCACATGT-----
NNTATTACATGTANNNT
 A C G T A C G T A G C T C G T A T A C G T G A C G T C A T A G C T C G A G C A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TAGCACATGT-
-GTCACGTGGM
 A G C T C G T A T A C G T G A C G T C A T A G C T C G A G C A T T C A G A C G T A C G T
A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAGCACATGT-----
NNTTTTACATGTANNNT
 A C G T A C G T A G C T C G T A T A C G T G A C G T C A T A G C T C G A G C A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

CLOCK/MA0819.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TAGCACATGT-
-AACACGTGTT
 A G C T C G T A T A C G T G A C G T C A T A G C T C G A G C A T T C A G A C G T A C G T
A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T