Information for 4-TGGTGGCTTGCTG (Motif 5)

C G A T A C T G A T C G G C A T A T C G A C T G A T G C A G C T C A G T C A T G A G T C C G A T A C T G
Reverse Opposite:
G T A C C G T A A C T G G A T C G T C A T C G A A T C G A G T C A T G C C G T A A T G C T A G C C G T A
p-value:1e-11
log p-value:-2.720e+01
Information Content per bp:1.774
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif234.5
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets43.0 +/- 25.5bp
Average Position of motif in Background50.3 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGGTGGCTTGCTG-----
---TNTCCTGCTGTGNNG
 C G A T A C T G A T C G G C A T A T C G A C T G A T G C A G C T C A G T C A T G A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGGTGGCTTGCTG-----
---NNTCCTGCTGTGNNN
 C G A T A C T G A T C G G C A T A T C G A C T G A T G C A G C T C A G T C A T G A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGGTGGCTTGCTG-----
---TCNCCTGCTGNGNNN
 C G A T A C T G A T C G G C A T A T C G A C T G A T G C A G C T C A G T C A T G A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TGGTGGCTTGCTG---
------CCTGCTGAGH
 C G A T A C T G A T C G G C A T A T C G A C T G A T G C A G C T C A G T C A T G A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGGTGGCTTGCTG
----GGCGCGCT-
 C G A T A C T G A T C G G C A T A T C G A C T G A T G C A G C T C A G T C A T G A G T C C G A T A C T G
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGGTGGCTTGCTG---
-GGCCYCCTGCTGDGH
 C G A T A C T G A T C G G C A T A T C G A C T G A T G C A G C T C A G T C A T G A G T C C G A T A C T G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGGTGGCTTGCTG---
--CTGGCAGNCTGCCA
 C G A T A C T G A T C G G C A T A T C G A C T G A T G C A G C T C A G T C A T G A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTGGCTTGCTG
NNNATTGGGGGTNTCCT-
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A T C G G C A T A T C G A C T G A T G C A G C T C A G T C A T G A G T C C G A T A C T G
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGGTGGCTTGCTG---
--TTGGCATGGTGCCA
 C G A T A C T G A T C G G C A T A T C G A C T G A T G C A G C T C A G T C A T G A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGGTGGCTTGCTG--
---CCCCCTGCTGTG
 C G A T A C T G A T C G G C A T A T C G A C T G A T G C A G C T C A G T C A T G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G