Information for 4-RKAAAGAGAAWAT (Motif 9)

C T A G A C T G C G T A C G T A C T G A C T A G C G T A A C T G C G T A C G T A C G A T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T A C G T G T A C A C G T A G T C A G C T A C G T A C G T G T A C A G T C
p-value:1e-8
log p-value:-1.852e+01
Information Content per bp:1.889
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif5.04%
Number of Background Sequences with motif59.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets38.5 +/- 30.6bp
Average Position of motif in Background50.8 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:RKAAAGAGAAWAT
-GAAAGTGAAAGT
 C T A G A C T G C G T A C G T A C T G A C T A G C G T A A C T G C G T A C G T A C G A T C G T A A C G T
A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

IRF7/MA0772.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-RKAAAGAGAAWAT
ACGAAAGCGAAAGT
 A C G T C T A G A C T G C G T A C G T A C T G A C T A G C G T A A C T G C G T A C G T A C G A T C G T A A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:RKAAAGAGAAWAT
-GAAAGTGAAAGT
 C T A G A C T G C G T A C G T A C T G A C T A G C G T A A C T G C G T A C G T A C G A T C G T A A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:RKAAAGAGAAWAT--
AGAAAGTGAAAGTGA
 C T A G A C T G C G T A C G T A C T G A C T A G C G T A A C T G C G T A C G T A C G A T C G T A A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:RKAAAGAGAAWAT
-GAAACTGAAACT
 C T A G A C T G C G T A C G T A C T G A C T A G C G T A A C T G C G T A C G T A C G A T C G T A A C G T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:RKAAAGAGAAWAT--
GGAAANTGAAACTNA
 C T A G A C T G C G T A C G T A C T G A C T A G C G T A A C T G C G T A C G T A C G A T C G T A A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----RKAAAGAGAAWAT----
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A C G T A C T G A C T A G C G T A A C T G C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:RKAAAGAGAAWAT
-GAAASYGAAASY
 C T A G A C T G C G T A C G T A C T G A C T A G C G T A A C T G C G T A C G T A C G A T C G T A A C G T
A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:RKAAAGAGAAWAT
-GRAASTGAAAST
 C T A G A C T G C G T A C G T A C T G A C T A G C G T A A C T G C G T A C G T A C G A T C G T A A C G T
A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RKAAAGAGAAWAT-----
GGAAAGCGAAACCAAAAC
 C T A G A C T G C G T A C G T A C T G A C T A G C G T A A C T G C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C