Information for 5-CACTGCAATAATGCAT (Motif 8)

G A T C C T G A T G A C A C G T C A T G A G T C C G T A G C T A C G A T C G T A C G T A A C G T C T A G A G T C G C T A A C G T
Reverse Opposite:
G T C A C A G T C T A G A G T C C G T A A C G T A C G T C G T A C G A T A C G T C T A G G A T C C G T A A C T G A G C T C T A G
p-value:1e-8
log p-value:-1.887e+01
Information Content per bp:1.757
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.2 +/- 27.5bp
Average Position of motif in Background66.3 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CACTGCAATAATGCAT
-----CACTAATT---
 G A T C C T G A T G A C A C G T C A T G A G T C C G T A G C T A C G A T C G T A C G T A A C G T C T A G A G T C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PH0019.1_Dbx2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CACTGCAATAATGCAT--
--TTTAATTAATTAATTC
 G A T C C T G A T G A C A C G T C A T G A G T C C G T A G C T A C G A T C G T A C G T A A C G T C T A G A G T C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACTGCAATAATGCAT
GACNTCATTAATAANN
 G A T C C T G A T G A C A C G T C A T G A G T C C G T A G C T A C G A T C G T A C G T A A C G T C T A G A G T C G C T A A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACTGCAATAATGCAT
CAATTGCAAAAATAT--
 A C G T G A T C C T G A T G A C A C G T C A T G A G T C C G T A G C T A C G A T C G T A C G T A A C G T C T A G A G T C G C T A A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

Hoxd8/MA0910.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACTGCAATAATGCAT-
TAAATAATTAATGGCTA
 G A T C C T G A T G A C A C G T C A T G A G T C C G T A G C T A C G A T C G T A C G T A A C G T C T A G A G T C G C T A A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACTGCAATAATGCAT-
TAAATAATTAATGGCTA
 G A T C C T G A T G A C A C G T C A T G A G T C C G T A G C T A C G A T C G T A C G T A A C G T C T A G A G T C G C T A A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CACTGCAATAATGCAT-
-------NTAATKGTTT
 G A T C C T G A T G A C A C G T C A T G A G T C C G T A G C T A C G A T C G T A C G T A A C G T C T A G A G T C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CACTGCAATAATGCAT
----TGAATTATGCAT
 G A T C C T G A T G A C A C G T C A T G A G T C C G T A G C T A C G A T C G T A C G T A A C G T C T A G A G T C G C T A A C G T
A C G T A C G T A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CACTGCAATAATGCAT
------AATAATT---
 G A T C C T G A T G A C A C G T C A T G A G T C C G T A G C T A C G A T C G T A C G T A A C G T C T A G A G T C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACTGCAATAATGCAT
AATCAATTCAATAATT---
 A C G T A C G T A C G T G A T C C T G A T G A C A C G T C A T G A G T C C G T A G C T A C G A T C G T A C G T A A C G T C T A G A G T C G C T A A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T A C G T A C G T