Information for 1-ATTTTGATGGTAG (Motif 2)

C G T A A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T A G A T C G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A T G C A G T C C G T A A C G T A G T C C G T A C G T A C G T A C G T A C G A T
p-value:1e-11
log p-value:-2.585e+01
Information Content per bp:1.887
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 22.9bp
Average Position of motif in Background59.1 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTGATGGTAG-
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T A G A T C G A C G T C G T A A C T G A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATTTTGATGGTAG
--TTTAAT-----
 C G T A A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T A G A T C G A C G T C G T A A C T G
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTGATGGTAG
NNANTTTTATTGGNNN
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T A G A T C G A C G T C G T A A C T G
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0056.1_Hoxa9/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTGATGGTAG-
ANTAATTTTATGGCCGN
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T A G A T C G A C G T C G T A A C T G A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ATTTTGATGGTAG
NCGTATTATAATCNTA-
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T A G A T C G A C G T C G T A A C T G
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTGATGGTAG
NNAATTTTATTGGNTN
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T A G A T C G A C G T C G T A A C T G
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATTTTGATGGTAG
-TTTTTATTGC--
 C G T A A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T A G A T C G A C G T C G T A A C T G
A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATTTTGATGGTAG
NTTTTATTGG---
 C G T A A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T A G A T C G A C G T C G T A A C T G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATTTTGATGGTAG
TTTTTATTGG---
 C G T A A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T A G A T C G A C G T C G T A A C T G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ATTTTGATGGTAG
-TTTTATKRGG--
 C G T A A C G T A C G T A C G T A C G T C T A G C G T A C G A T C T A G A T C G A C G T C G T A A C T G
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T