Information for 8-TTGAAATTACGTTTGT (Motif 9)

A C G T A C G T C T A G G T C A C G T A G T C A A G C T A C G T G T C A G T A C A C T G A G C T A C G T A C G T A C T G C G A T
Reverse Opposite:
C G T A G T A C G T C A C G T A C T G A G T A C A C T G A C G T G T C A C T G A A C G T A C G T A C G T A G T C C G T A C G T A
p-value:1e-7
log p-value:-1.624e+01
Information Content per bp:1.754
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif30.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets41.0 +/- 17.5bp
Average Position of motif in Background66.7 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTGAAATTACGTTTGT
TTTGAAACCG-------
 A C G T A C G T A C G T C T A G G T C A C G T A G T C A A G C T A C G T G T C A G T A C A C T G A G C T A C G T A C G T A C T G C G A T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTGAAATTACGTTTGT
NATTCAAAT---------
 A C G T A C G T A C G T A C G T C T A G G T C A C G T A G T C A A G C T A C G T G T C A G T A C A C T G A G C T A C G T A C G T A C T G C G A T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:3
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTGAAATTACGTTTGT-
---TACTTCCGCTTTTT
 A C G T A C G T C T A G G T C A C G T A G T C A A G C T A C G T G T C A G T A C A C T G A G C T A C G T A C G T A C T G C G A T A C G T
A C G T A C G T A C G T G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TTGAAATTACGTTTGT
----ACTTTCGTTTCT
 A C G T A C G T C T A G G T C A C G T A G T C A A G C T A C G T G T C A G T A C A C T G A G C T A C G T A C G T A C T G C G A T
A C G T A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---TTGAAATTACGTTTGT
CCTTTGATGT---------
 A C G T A C G T A C G T A C G T A C G T C T A G G T C A C G T A G T C A A G C T A C G T G T C A G T A C A C T G A G C T A C G T A C G T A C T G C G A T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TTGAAATTACGTTTGT
-TNGAATTTCATTNAN
 A C G T A C G T C T A G G T C A C G T A G T C A A G C T A C G T G T C A G T A C A C T G A G C T A C G T A C G T A C T G C G A T
A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--TTGAAATTACGTTTGT
AGATGCAATCCC------
 A C G T A C G T A C G T A C G T C T A G G T C A C G T A G T C A A G C T A C G T G T C A G T A C A C T G A G C T A C G T A C G T A C T G C G A T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:8
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---TTGAAATTACGTTTGT
TATTGGTAATTACCTT---
 A C G T A C G T A C G T A C G T A C G T C T A G G T C A C G T A G T C A A G C T A C G T G T C A G T A C A C T G A G C T A C G T A C G T A C T G C G A T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T A C G T A C G T A C G T

PH0071.1_Hoxc6/Jaspar

Match Rank:9
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---TTGAAATTACGTTTGT
NNTNATTAATTAATTTG--
 A C G T A C G T A C G T A C G T A C G T C T A G G T C A C G T A G T C A A G C T A C G T G T C A G T A C A C T G A G C T A C G T A C G T A C T G C G A T
G C A T A C G T A G C T G C A T T G C A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A G C T C G A T G A C T T C A G A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.47
Offset:-5
Orientation:reverse strand
Alignment:-----TTGAAATTACGTTTGT
NNNTATTGAATTGNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T C A C G T A G T C A A G C T A C G T G T C A G T A C A C T G A G C T A C G T A C G T A C T G C G A T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T A C G T A C G T A C G T