Information for 6-DCTGACCTCTGADHCT (Motif 6)

C A G T A G T C A G C T C T A G C T G A T G A C G A T C C G A T A G T C C G A T A C T G C G T A C A T G G A C T A T G C A G C T
Reverse Opposite:
C T G A A T C G C G T A G A T C A C G T A G T C C G T A A C T G C G T A C T A G A C T G A G C T A G T C C T G A C T A G G C T A
p-value:1e-7
log p-value:-1.691e+01
Information Content per bp:1.682
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif24.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets32.0 +/- 32.5bp
Average Position of motif in Background44.2 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:DCTGACCTCTGADHCT-
--TGACCTCTGACCCCN
 C A G T A G T C A G C T C T A G C T G A T G A C G A T C C G A T A G T C C G A T A C T G C G T A C A T G G A C T A T G C A G C T A C G T
A C G T A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:DCTGACCTCTGADHCT
--TGACCTTTGACCTC
 C A G T A G T C A G C T C T A G C T G A T G A C G A T C C G A T A G T C C G A T A C T G C G T A C A T G G A C T A T G C A G C T
A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

RXRB/MA0855.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:DCTGACCTCTGADHCT
--TGACCTTTGACCCC
 C A G T A G T C A G C T C T A G C T G A T G A C G A T C C G A T A G T C C G A T A C T G C G T A C A T G G A C T A T G C A G C T
A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:DCTGACCTCTGADHCT
-CTGACCTTTG-----
 C A G T A G T C A G C T C T A G C T G A T G A C G A T C C G A T A G T C C G A T A C T G C G T A C A T G G A C T A T G C A G C T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:DCTGACCTCTGADHCT
--TGACCTTTGACCCC
 C A G T A G T C A G C T C T A G C T G A T G A C G A T C C G A T A G T C C G A T A C T G C G T A C A T G G A C T A T G C A G C T
A C G T A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:DCTGACCTCTGADHCT
--TGACCTTTGACCCC
 C A G T A G T C A G C T C T A G C T G A T G A C G A T C C G A T A G T C C G A T A C T G C G T A C A T G G A C T A T G C A G C T
A C G T A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

Nr2f6/MA0677.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:DCTGACCTCTGADHCT
--TGACCTTTGACCTN
 C A G T A G T C A G C T C T A G C T G A T G A C G A T C C G A T A G T C C G A T A C T G C G T A C A T G G A C T A T G C A G C T
A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:DCTGACCTCTGADHCT-
--TGGACTTTGNNCTCN
 C A G T A G T C A G C T C T A G C T G A T G A C G A T C C G A T A G T C C G A T A C T G C G T A C A T G G A C T A T G C A G C T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:7
Orientation:forward strand
Alignment:DCTGACCTCTGADHCT-
-------ACTGAAACCA
 C A G T A G T C A G C T C T A G C T G A T G A C G A T C C G A T A G T C C G A T A C T G C G T A C A T G G A C T A T G C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:DCTGACCTCTGADHCT--
--TGGACTTTGNNCTNTG
 C A G T A G T C A G C T C T A G C T G A T G A C G A T C C G A T A G T C C G A T A C T G C G T A C A T G G A C T A T G C A G C T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G