p-value: | 1e-2 |
log p-value: | -5.667e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 1.0 |
Percentage of Target Sequences with motif | 6.25% |
Number of Background Sequences with motif | 12.4 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 0.0 +/- 0.0bp |
Average Position of motif in Background | 30.5 +/- 14.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0114.1_Nkx2-5/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAAATTTAAGTCTTTT- -AAATTCAAGTGGNTTN |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAAATTTAAGTCTTTT- -AATNTTAAGTGGNTNN |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CAAATTTAAGTCTTTT--- --NATTTAAGTACTTANNA |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAAATTTAAGTCTTTT- -AATTTCAAGTGGCTTN |
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PH0116.1_Nkx2-9/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CAAATTTAAGTCTTTT--- --NATTTAAGTACTTNAAA |
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PH0066.1_Hoxc11/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAAATTTAAGTCTTTT NNNTTTTACGACNTTN |
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PH0171.1_Nkx2-1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAAATTTAAGTCTTTT- -AANTTCAAGTGGCTTN |
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PH0047.1_Hoxa11/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAAATTTAAGTCTTTT NNGTTTTACGACTTTA |
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PH0088.1_Isl2/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CAAATTTAAGTCTTTT-- --AAATTAATTGATTTNG |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CAAATTTAAGTCTTTT -----TTAAGTGCTT- |
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