Information for 23-AGTTTGACCC (Motif 52)

C G T A A C T G A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A G T C C G T A C G T A C G T A A G T C A C G T
p-value:1e-3
log p-value:-7.052e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background86.2 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTTGACCC-
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTGACCC------
NNANTTGACCCCTNNNN
 A C G T C G T A A C T G A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGTTTGACCC------
NNNNTGACCCGGCGCG
 C G T A A C T G A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AGTTTGACCC
----TGACCT
 C G T A A C T G A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTGACCC------
NNNNTTGACCCCTNNNN
 A C G T C G T A A C T G A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:AGTTTGACCC--
----TGACCYCT
 C G T A A C T G A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGTTTGACCC------
TGTCGTGACCCCTTAAT
 A C G T C G T A A C T G A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGTTTGACCC------
NNCNTGACCCCGCTCT
 C G T A A C T G A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGTTTGACCC--
----TGACCTYA
 C G T A A C T G A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTTTGACCC---
CNNTTGACCTTTG
 C G T A A C T G A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G