Information for 22-AGCTCATGGG (Motif 49)

C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C G T A C T G C G T A A C T G A G T C A C G T
p-value:1e-3
log p-value:-7.458e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 0.0bp
Average Position of motif in Background16.8 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCATGGG
AAGCACATGG-
 A C G T C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C T G
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCTCATGGG
CAAAGGTCAAGGG
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C T G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCTCATGGG--
AGGTCAAGGTCA
 C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCTCATGGG--
AGGTCAAGGTCA
 C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGCTCATGGG---
-GCGCATGCGCAC
 C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCTCATGGG-------
--CTGATTGGTCNATTT
 C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGCTCATGGG--
--CCGATTGGCT
 C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCTCATGGG----
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCATGGG----
RGSMTBCTGGGAAAT
 A C G T C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCTCATGGG-
-GTTAATGGCC
 C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C G T
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C