Information for 19-TATACTAATGAGAGTT (Motif 40)

A C G T C G T A A C G T C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C G T C G T A A C G T C G T A
p-value:1e-3
log p-value:-8.151e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU1F1/MA0784.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TATACTAATGAGAGTT
AATATGCAAATTAG----
 A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TATACTAATGAGAGTT
WATGCAAATGAG----
 A C G T C G T A A C G T C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TATACTAATGAGAGTT-
TAAACTAATTAGCTTTG
 A C G T C G T A A C G T C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G

PH0092.1_Lhx2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TATACTAATGAGAGTT-
TAAACTAATTAGTGAAC
 A C G T C G T A A C G T C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
C G A T T G C A G T C A T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A T G G T C A G T C A A T G C

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TATACTAATGAGAGTT
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TATACTAATGAGAGTT
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TATACTAATGAGAGTT
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TATACTAATGAGAGTT
TTATGCAAATTA-----
 A C G T A C G T C G T A A C G T C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T A C G T A C G T A C G T

PH0097.1_Lhx6_2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TATACTAATGAGAGTT-
TCCACTAATTAGCGGTT
 A C G T C G T A A C G T C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T

PH0096.1_Lhx6_1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TATACTAATGAGAGTT-
TACATTAATTAACGNTN
 A C G T C G T A A C G T C G T A A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
C G A T T C G A G T A C T G C A G A C T G A C T T C G A C T G A A G C T A G C T C T G A C T G A A G T C C A T G A G T C G C A T A T G C