Information for 4-ATTGKRAACAATAACT (Motif 4)

T G C A A C G T A C G T C A T G C A T G C T A G C T G A T G C A T G A C C G T A C T G A C A G T T C G A G C T A G A T C C G A T
Reverse Opposite:
C G T A C A T G C G A T A C G T G T C A A G C T A C G T A C T G A C G T G A C T G A C T G T A C G T A C T G C A T G C A A C G T
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.620
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif31.25%
Number of Background Sequences with motif163.5
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets74.2 +/- 13.4bp
Average Position of motif in Background46.4 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0072.1_Sox5_1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:ATTGKRAACAATAACT-
-TTTAGAACAATAAAAT
 T G C A A C G T A C G T C A T G C A T G C T A G C T G A T G C A T G A C C G T A C T G A C A G T T C G A G C T A G A T C C G A T A C G T
A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATTGKRAACAATAACT
NTTNAGAACAATTA--
 T G C A A C G T A C G T C A T G C A T G C T A G C T G A T G C A T G A C C G T A C T G A C A G T T C G A G C T A G A T C C G A T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ATTGKRAACAATAACT-
-TTAAGAACAATAAATT
 T G C A A C G T A C G T C A T G C A T G C T A G C T G A T G C A T G A C C G T A C T G A C A G T T C G A G C T A G A T C C G A T A C G T
A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:ATTGKRAACAATAACT
---GTAAACAAT----
 T G C A A C G T A C G T C A T G C A T G C T A G C T G A T G C A T G A C C G T A C T G A C A G T T C G A G C T A G A T C C G A T
A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:ATTGKRAACAATAACT
-----NAACAAT----
 T G C A A C G T A C G T C A T G C A T G C T A G C T G A T G C A T G A C C G T A C T G A C A G T T C G A G C T A G A T C C G A T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ATTGKRAACAATAACT--
-TAGTGAACAATAGATTT
 T G C A A C G T A C G T C A T G C A T G C T A G C T G A T G C A T G A C C G T A C T G A C A G T T C G A G C T A G A T C C G A T A C G T A C G T
A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATTGKRAACAATAACT
NNTNANAACAATTNNA
 T G C A A C G T A C G T C A T G C A T G C T A G C T G A T G C A T G A C C G T A C T G A C A G T T C G A G C T A G A T C C G A T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATTGKRAACAATAACT--
-TNNAGAACAATANATNN
 T G C A A C G T A C G T C A T G C A T G C T A G C T G A T G C A T G A C C G T A C T G A C A G T T C G A G C T A G A T C C G A T A C G T A C G T
A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:ATTGKRAACAATAACT
------AACAAT----
 T G C A A C G T A C G T C A T G C A T G C T A G C T G A T G C A T G A C C G T A C T G A C A G T T C G A G C T A G A T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATTGKRAACAATAACT-
TCACGGAACAATAGGTG
 T G C A A C G T A C G T C A T G C A T G C T A G C T G A T G C A T G A C C G T A C T G A C A G T T C G A G C T A G A T C C G A T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G