Information for 20-ACCAGCAGTGACC (Motif 38)

C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C G T A C T G A C T G A C G T
p-value:1e-3
log p-value:-8.151e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACCAGCAGTGACC-
TGACCTNTAGTAACCC
 A C G T A C G T C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACCAGCAGTGACC----
TGACCTAAAGTAACCTCTG
 A C G T A C G T C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACCAGCAGTGACC
-CCAGCTGTTN--
 C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C
A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:ACCAGCAGTGACC-
--------TGACCT
 C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:ACCAGCAGTGACC--
-------GTGACCTT
 C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:ACCAGCAGTGACC---
--------TGACCYCT
 C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACCAGCAGTGACC
NAHCAGCTGD----
 A C G T C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T

ELK1/MA0028.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACCAGCAGTGACC
ACCGGAAGTG---
 C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C
C T G A T A G C T G A C A C T G A C T G T G C A G C T A T C A G A G C T C T A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACCAGCAGTGACC
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACCAGCAGTGACC
ANCAGCTG-----
 C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T