Information for 3-AKKSATGTKAMARMAA (Motif 3)

C G T A A C G T A C G T A T G C C G T A A C G T A C T G A C G T A C T G C T G A G T C A C G T A C T A G T G A C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C A C G T A C G T A G C T G T A C C G T A A G T C C G T A A C G T A T C G G T C A G T C A A C G T
p-value:1e-9
log p-value:-2.161e+01
Information Content per bp:1.827
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.0 +/- 7.8bp
Average Position of motif in Background59.7 +/- 42.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AKKSATGTKAMARMAA
-GTCATGTGACC----
 C G T A A C G T A C G T A T G C C G T A A C G T A C T G A C G T A C T G C T G A G T C A C G T A C T A G T G A C C G T A C G T A
A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AKKSATGTKAMARMAA---
----ATGTCACAACAACAC
 C G T A A C G T A C G T A T G C C G T A A C G T A C T G A C G T A C T G C T G A G T C A C G T A C T A G T G A C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AKKSATGTKAMARMAA
-RTCATGTGAC-----
 C G T A A C G T A C G T A T G C C G T A A C G T A C T G A C G T A C T G C T G A G T C A C G T A C T A G T G A C C G T A C G T A
A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AKKSATGTKAMARMAA----
----ATATCAAAACAAAACA
 C G T A A C G T A C G T A T G C C G T A A C G T A C T G A C G T A C T G C T G A G T C A C G T A C T A G T G A C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AKKSATGTKAMARMAA
ACATTCATGACACG----
 A C G T A C G T C G T A A C G T A C G T A T G C C G T A A C G T A C T G A C G T A C T G C T G A G T C A C G T A C T A G T G A C C G T A C G T A
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AKKSATGTKAMARMAA
AATATACATGTAAAACA--
 A C G T A C G T A C G T C G T A A C G T A C G T A T G C C G T A A C G T A C T G A C G T A C T G C T G A G T C A C G T A C T A G T G A C C G T A C G T A
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AKKSATGTKAMARMAA-----
-----NNTNANAACAATTNNA
 C G T A A C G T A C G T A T G C C G T A A C G T A C T G A C G T A C T G C T G A G T C A C G T A C T A G T G A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AKKSATGTKAMARMAA
BRGTCACGTGAC-----
 A C G T C G T A A C G T A C G T A T G C C G T A A C G T A C T G A C G T A C T G C T G A G T C A C G T A C T A G T G A C C G T A C G T A
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C A C G T A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----AKKSATGTKAMARMAA
NNNNNATTGATGNGTGN----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T G C C G T A A C G T A C T G A C G T A C T G C T G A G T C A C G T A C T A G T G A C C G T A C G T A
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T A C G T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AKKSATGTKAMARMAA
----ANGTTACATAA-
 C G T A A C G T A C G T A T G C C G T A A C G T A C T G A C G T A C T G C T G A G T C A C G T A C T A G T G A C C G T A C G T A
A C G T A C G T A C G T A C G T C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T