Information for 13-ATTBGVAGTGTTHCAH (Motif 22)

C G T A C A G T A C G T A T C G C A T G T A C G C T G A C T A G A G C T C T A G G A C T A C G T G A C T G T A C C G T A G C T A
Reverse Opposite:
C A G T G A C T A C T G C T G A C G T A C T G A G A T C T C G A G A T C A G C T A T C G G T A C T A G C G T C A G T C A C G A T
p-value:1e-5
log p-value:-1.188e+01
Information Content per bp:1.631
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif129.7
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets55.0 +/- 27.2bp
Average Position of motif in Background56.4 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0116.1_Nkx2-9/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATTBGVAGTGTTHCAH--
-TTTTAAGTACTTAAATT
 C G T A C A G T A C G T A T C G C A T G T A C G C T G A C T A G A G C T C T A G G A C T A C G T G A C T G T A C C G T A G C T A A C G T A C G T
A C G T C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATTBGVAGTGTTHCAH--
-TACTAAGTACTTAAATG
 C G T A C A G T A C G T A T C G C A T G T A C G C T G A C T A G A G C T C T A G G A C T A C G T G A C T G T A C C G T A G C T A A C G T A C G T
A C G T C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

SOX8/MA0868.1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATTBGVAGTGTTHCAH
AACAATGTGCAGTGTT----
 A C G T A C G T A C G T A C G T C G T A C A G T A C G T A T C G C A T G T A C G C T G A C T A G A G C T C T A G G A C T A C G T G A C T G T A C C G T A G C T A
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ATTBGVAGTGTTHCAH--
------GGGATTGCATNN
 C G T A C A G T A C G T A T C G C A T G T A C G C T G A C T A G A G C T C T A G G A C T A C G T G A C T G T A C C G T A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ATTBGVAGTGTTHCAH-
-CTTTAAGTACTTAATG
 C G T A C A G T A C G T A T C G C A T G T A C G C T G A C T A G A G C T C T A G G A C T A C G T G A C T G T A C C G T A G C T A A C G T
A C G T G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ATTBGVAGTGTTHCAH
---TTAAGTGCTT---
 C G T A C A G T A C G T A T C G C A T G T A C G C T G A C T A G A G C T C T A G G A C T A C G T G A C T G T A C C G T A G C T A
A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ATTBGVAGTGTTHCAH
GAACAATTGCAGTGTT----
 A C G T A C G T A C G T A C G T C G T A C A G T A C G T A T C G C A T G T A C G C T G A C T A G A G C T C T A G G A C T A C G T G A C T G T A C C G T A G C T A
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ATTBGVAGTGTTHCAH
------NATGTTGCAA
 C G T A C A G T A C G T A T C G C A T G T A C G C T G A C T A G A G C T C T A G G A C T A C G T G A C T G T A C C G T A G C T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:ATTBGVAGTGTTHCAH-
------NTTGATACATT
 C G T A C A G T A C G T A T C G C A T G T A C G C T G A C T A G A G C T C T A G G A C T A C G T G A C T G T A C C G T A G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:ATTBGVAGTGTTHCAH-
--------NATTCAAAT
 C G T A C A G T A C G T A T C G C A T G T A C G C T G A C T A G A G C T C T A G G A C T A C G T G A C T G T A C C G T A G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T