Information for 10-MCTSRKARSARGM (Motif 18)

G T A C A G T C A C G T A T C G C T A G A C G T C G T A C T G A A T C G C G T A C T G A A C T G G T C A
Reverse Opposite:
A C G T A G T C A G C T A C G T T A C G A G C T A C G T G T C A A G T C T A C G C G T A A C T G A C T G
p-value:1e-5
log p-value:-1.306e+01
Information Content per bp:1.765
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif87.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets62.7 +/- 20.9bp
Average Position of motif in Background56.1 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---MCTSRKARSARGM-
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T G T A C A G T C A C G T A T C G C T A G A C G T C G T A C T G A A T C G C G T A C T G A A C T G G T C A A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:MCTSRKARSARGM
GCTCGTAAAAA--
 G T A C A G T C A C G T A T C G C T A G A C G T C G T A C T G A A T C G C G T A C T G A A C T G G T C A
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--MCTSRKARSARGM-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T G T A C A G T C A C G T A T C G C T A G A C G T C G T A C T G A A T C G C G T A C T G A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--MCTSRKARSARGM-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T G T A C A G T C A C G T A T C G C T A G A C G T C G T A C T G A A T C G C G T A C T G A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PH0048.1_Hoxa13/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---MCTSRKARSARGM
AAACCTCGTAAAATTT
 A C G T A C G T A C G T G T A C A G T C A C G T A T C G C T A G A C G T C G T A C T G A A T C G C G T A C T G A A C T G G T C A
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:MCTSRKARSARGM--
CCACACAGCAGGAGA
 G T A C A G T C A C G T A T C G C T A G A C G T C G T A C T G A A T C G C G T A C T G A A C T G G T C A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----MCTSRKARSARGM
CAATCACTGGCAGAAT--
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C G T A T C G C T A G A C G T C G T A C T G A A T C G C G T A C T G A A C T G G T C A
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:MCTSRKARSARGM
CSTGGGAAAD---
 G T A C A G T C A C G T A T C G C T A G A C G T C G T A C T G A A T C G C G T A C T G A A C T G G T C A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---MCTSRKARSARGM
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T G T A C A G T C A C G T A T C G C T A G A C G T C G T A C T G A A T C G C G T A C T G A A C T G G T C A
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:MCTSRKARSARGM
CCYMATAAAA---
 G T A C A G T C A C G T A T C G C T A G A C G T C G T A C T G A A T C G C G T A C T G A A C T G G T C A
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T