Information for 6-ATTWAGCCCAAAC (Motif 15)

C G T A A G C T C G A T G C A T C G T A A C T G G T A C A G T C A G T C G T C A G T C A G T C A A G T C
Reverse Opposite:
T A C G A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G A T C G T A C G T A C T G A C G A T
p-value:1e-6
log p-value:-1.460e+01
Information Content per bp:1.693
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif223.1
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets26.5 +/- 9.6bp
Average Position of motif in Background51.4 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATTWAGCCCAAAC--
---NWAACCACADNN
 C G T A A G C T C G A T G C A T C G T A A C T G G T A C A G T C A G T C G T C A G T C A G T C A A G T C A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PH0130.1_Otx2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATTWAGCCCAAAC
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T C G T A A G C T C G A T G C A T C G T A A C T G G T A C A G T C A G T C G T C A G T C A G T C A A G T C
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PH0129.1_Otx1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATTWAGCCCAAAC
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T C G T A A G C T C G A T G C A T C G T A A C T G G T A C A G T C A G T C G T C A G T C A G T C A A G T C
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0138.1_Pitx2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATTWAGCCCAAAC
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T A C G T C G T A A G C T C G A T G C A T C G T A A C T G G T A C A G T C A G T C G T C A G T C A G T C A A G T C
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ATTWAGCCCAAAC--
----AAACCACAGAN
 C G T A A G C T C G A T G C A T C G T A A C T G G T A C A G T C A G T C G T C A G T C A G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATTWAGCCCAAAC
---CTGCCCGCA-
 C G T A A G C T C G A T G C A T C G T A A C T G G T A C A G T C A G T C G T C A G T C A G T C A A G T C
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATTWAGCCCAAAC-----
-ANNTNCCCACCCANNAC
 C G T A A G C T C G A T G C A T C G T A A C T G G T A C A G T C A G T C G T C A G T C A G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATTWAGCCCAAAC
CTTAATCCC----
 C G T A A G C T C G A T G C A T C G T A A C T G G T A C A G T C A G T C G T C A G T C A G T C A A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ATTWAGCCCAAAC-
----AAACCACAGC
 C G T A A G C T C G A T G C A T C G T A A C T G G T A C A G T C A G T C G T C A G T C A G T C A A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PH0124.1_Obox5_1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ATTWAGCCCAAAC
NANANTTAATCCCNNNN
 A C G T A C G T A C G T A C G T C G T A A G C T C G A T G C A T C G T A A C T G G T A C A G T C A G T C G T C A G T C A G T C A A G T C
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A