Information for 5-AAAANGABTTTATTTV (Motif 6)

C G T A C G T A C G T A C G T A A C T G C T A G C G T A A T G C A C G T A G C T G A C T C G T A C G A T A C G T A C G T T G C A
Reverse Opposite:
A C G T C G T A C G T A C G T A G C A T C T G A T C G A C G T A T A C G A C G T G A T C T A G C C G A T C G A T A C G T C G A T
p-value:1e-11
log p-value:-2.722e+01
Information Content per bp:1.701
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.4 +/- 19.0bp
Average Position of motif in Background60.4 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAAANGABTTTATTTV
NNTAAAAACGATGTTNT---
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G C T A G C G T A A T G C A C G T A G C T G A C T C G T A C G A T A C G T A C G T T G C A
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T A C G T A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:2
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AAAANGABTTTATTTV
--GATTAATTAATTT-
 C G T A C G T A C G T A C G T A A C T G C T A G C G T A A T G C A C G T A G C T G A C T C G T A C G A T A C G T A C G T T G C A
A C G T A C G T T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAAANGABTTTATTTV
AAAATGGCGCCATTTT
 C G T A C G T A C G T A C G T A A C T G C T A G C G T A A T G C A C G T A G C T G A C T C G T A C G A T A C G T A C G T T G C A
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:AAAANGABTTTATTTV------
-------CTTTGTTTACTTTTN
 C G T A C G T A C G T A C G T A A C T G C T A G C G T A A T G C A C G T A G C T G A C T C G T A C G A T A C G T A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

PH0108.1_Msx3/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAAANGABTTTATTTV
CAAAACCAATTAATTT-
 A C G T C G T A C G T A C G T A C G T A A C T G C T A G C G T A A T G C A C G T A G C T G A C T C G T A C G A T A C G T A C G T T G C A
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AAAANGABTTTATTTV---
--NTNAATTTTATTGNATT
 C G T A C G T A C G T A C G T A A C T G C T A G C G T A A T G C A C G T A G C T G A C T C G T A C G A T A C G T A C G T T G C A A C G T A C G T A C G T
A C G T A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:AAAANGABTTTATTTV----
--------KCTATTTTTRGH
 C G T A C G T A C G T A C G T A A C T G C T A G C G T A A T G C A C G T A G C T G A C T C G T A C G A T A C G T A C G T T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:AAAANGABTTTATTTV------
-----NNNTTTGTTTACNTTNN
 C G T A C G T A C G T A C G T A A C T G C T A G C G T A A T G C A C G T A G C T G A C T C G T A C G A T A C G T A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:AAAANGABTTTATTTV------
-----NNNTTTGTTTACNTTNN
 C G T A C G T A C G T A C G T A A C T G C T A G C G T A A T G C A C G T A G C T G A C T C G T A C G A T A C G T A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:AAAANGABTTTATTTV
----TAATTNVATTAN
 C G T A C G T A C G T A C G T A A C T G C T A G C G T A A T G C A C G T A G C T G A C T C G T A C G A T A C G T A C G T T G C A
A C G T A C G T A C G T A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G