Information for 3-TGCCAGGKGGCGCTGT (Motif 3)

C G A T C A T G A G T C G A T C G T C A A C T G C T A G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C T G G A C T
Reverse Opposite:
C G T A A G T C C G T A A C T G A G T C C T A G A G T C A G T C T G A C G A T C A G T C A C G T C T A G A C T G G T A C G C T A
p-value:1e-23
log p-value:-5.493e+01
Information Content per bp:1.814
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 20.4bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGCCAGGKGGCGCTGT--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T C G A T C A T G A G T C G A T C G T C A A C T G C T A G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C T G G A C T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCCAGGKGGCGCTGT
TGTCAGGGGGCG----
 C G A T C A T G A G T C G A T C G T C A A C T G C T A G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C T G G A C T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGCCAGGKGGCGCTGT
TGGCCACCAGGGGGCGCTA-
 A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T C A A C T G C T A G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C T G G A C T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGCCAGGKGGCGCTGT
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T C A A C T G C T A G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C T G G A C T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGCCAGGKGGCGCTGT
-AACAGATGGC-----
 C G A T C A T G A G T C G A T C G T C A A C T G C T A G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C T G G A C T
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGCCAGGKGGCGCTGT-
NNNAAGGGGGCGGGNNN
 C G A T C A T G A G T C G A T C G T C A A C T G C T A G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C T G G A C T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGCCAGGKGGCGCTGT
----RGKGGGCGGAGC
 C G A T C A T G A G T C G A T C G T C A A C T G C T A G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C T G G A C T
A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGCCAGGKGGCGCTGT
AAGGCCAGATGGTCCGG-
 A C G T A C G T C G A T C A T G A G T C G A T C G T C A A C T G C T A G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C T G G A C T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGCCAGGKGGCGCTGT---
--NNNNTTGGCGCCGANNN
 C G A T C A T G A G T C G A T C G T C A A C T G C T A G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C T G G A C T A C G T A C G T A C G T
A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

SP8/MA0747.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGCCAGGKGGCGCTGT
----AGTGGGCGTGGC
 C G A T C A T G A G T C G A T C G T C A A C T G C T A G A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C T G G A C T
A C G T A C G T A C G T A C G T C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C