Information for 6-TAATATTTTTAAA (Motif 9)

C G A T C T G A G C T A A C G T G C T A A C G T A C G T A C G T A C G T C G A T G T C A C G T A G T C A
Reverse Opposite:
C A G T C G A T C A G T C G T A T G C A C G T A C G T A T G C A C G A T G T C A C G A T A G C T G C T A
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.667
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.80%
Number of Background Sequences with motif409.8
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets50.6 +/- 27.8bp
Average Position of motif in Background48.9 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAATATTTTTAAA
CTAATATTGCTAAA
 A C G T C G A T C T G A G C T A A C G T G C T A A C G T A C G T A C G T A C G T C G A T G T C A C G T A G T C A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAATATTTTTAAA
CTAATATTGCTAAA
 A C G T C G A T C T G A G C T A A C G T G C T A A C G T A C G T A C G T A C G T C G A T G T C A C G T A G T C A
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TAATATTTTTAAA--
TTCTATTTTTAGNNN
 C G A T C T G A G C T A A C G T G C T A A C G T A C G T A C G T A C G T C G A T G T C A C G T A G T C A A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TAATATTTTTAAA
-KCTATTTTTRGH
 C G A T C T G A G C T A A C G T G C T A A C G T A C G T A C G T A C G T C G A T G T C A C G T A G T C A
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TAATATTTTTAAA-
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T C G A T C T G A G C T A A C G T G C T A A C G T A C G T A C G T A C G T C G A T G T C A C G T A G T C A A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0129.1_Glis2_2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAATATTTTTAAA--
-AATATTAATAAAGA
 C G A T C T G A G C T A A C G T G C T A A C G T A C G T A C G T A C G T C G A T G T C A C G T A G T C A A C G T A C G T
A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAATATTTTTAAA
-GCTATTTTTAGC
 C G A T C T G A G C T A A C G T G C T A A C G T A C G T A C G T A C G T C G A T G T C A C G T A G T C A
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAATATTTTTAAA
-AATAATT-----
 C G A T C T G A G C T A A C G T G C T A A C G T A C G T A C G T A C G T C G A T G T C A C G T A G T C A
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAATATTTTTAAA-
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T C G A T C T G A G C T A A C G T G C T A A C G T A C G T A C G T A C G T C G A T G T C A C G T A G T C A A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAATATTTTTAAA
GAATGTTTGTTT-
 C G A T C T G A G C T A A C G T G C T A A C G T A C G T A C G T A C G T C G A T G T C A C G T A G T C A
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T