Information for 3-SCAGGGGGCGCTGCAG (Motif 4)

A T G C A G T C C G T A A T C G C T A G C T A G A C T G T A C G T G A C C A T G A G T C A G C T A C T G T A G C C G T A T A C G
Reverse Opposite:
A T G C G C A T A T C G G T A C C T G A A C T G G T A C A C T G A G T C G T A C A G T C G A T C A T G C C G A T T C A G T A C G
p-value:1e-25
log p-value:-5.793e+01
Information Content per bp:1.712
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.68%
Number of Background Sequences with motif118.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets49.8 +/- 20.1bp
Average Position of motif in Background51.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----SCAGGGGGCGCTGCAG
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T G C A G T C C G T A A T C G C T A G C T A G A C T G T A C G T G A C C A T G A G T C A G C T A C T G T A G C C G T A T A C G
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:SCAGGGGGCGCTGCAG
--RGKGGGCGGAGC--
 A T G C A G T C C G T A A T C G C T A G C T A G A C T G T A C G T G A C C A T G A G T C A G C T A C T G T A G C C G T A T A C G
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:SCAGGGGGCGCTGCAG-
-TTGGGGGCGCCCCTAG
 A T G C A G T C C G T A A T C G C T A G C T A G A C T G T A C G T G A C C A T G A G T C A G C T A C T G T A G C C G T A T A C G A C G T
A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--SCAGGGGGCGCTGCAG
TGTCAGGGGGCG------
 A C G T A C G T A T G C A G T C C G T A A T C G C T A G C T A G A C T G T A C G T G A C C A T G A G T C A G C T A C T G T A G C C G T A T A C G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------SCAGGGGGCGCTGCAG
TGGCCACCAGGGGGCGCTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A A T C G C T A G C T A G A C T G T A C G T G A C C A T G A G T C A G C T A C T G T A G C C G T A T A C G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--SCAGGGGGCGCTGCAG
NNNAAGGGGGCGGGNNN-
 A C G T A C G T A T G C A G T C C G T A A T C G C T A G C T A G A C T G T A C G T G A C C A T G A G T C A G C T A C T G T A G C C G T A T A C G
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:SCAGGGGGCGCTGCAG
--RGKGGGCGKGGC--
 A T G C A G T C C G T A A T C G C T A G C T A G A C T G T A C G T G A C C A T G A G T C A G C T A C T G T A G C C G T A T A C G
A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:SCAGGGGGCGCTGCAG
--AGTGGGCGTGGC--
 A T G C A G T C C G T A A T C G C T A G C T A G A C T G T A C G T G A C C A T G A G T C A G C T A C T G T A G C C G T A T A C G
A C G T A C G T C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:SCAGGGGGCGCTGCAG
---GGGGGCGGGGCC-
 A T G C A G T C C G T A A T C G C T A G C T A G A C T G T A C G T G A C C A T G A G T C A G C T A C T G T A G C C G T A T A C G
A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:SCAGGGGGCGCTGCAG
--RGTGGGYGTGGC--
 A T G C A G T C C G T A A T C G C T A G C T A G A C T G T A C G T G A C C A T G A G T C A G C T A C T G T A G C C G T A T A C G
A C G T A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C A C G T A C G T