Information for 8-TTAATGCCAGGAA (Motif 13)

C G A T A C G T C G T A C G T A A C G T A C T G G T A C A G T C C G T A A C T G C T A G C G T A C G T A
Reverse Opposite:
C G A T A C G T A G T C A G T C A C G T A C T G A C T G G T A C C G T A A C G T A C G T G T C A C G T A
p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.902
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.6 +/- 21.1bp
Average Position of motif in Background42.7 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0063.1_Hoxb8/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTAATGCCAGGAA
TTTATTAATTGCNNGN-
 A C G T A C G T A C G T A C G T C G A T A C G T C G T A C G T A A C G T A C T G G T A C A G T C C G T A A C T G C T A G C G T A C G T A
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TTAATGCCAGGAA-
----TTCCNGGAAG
 C G A T A C G T C G T A C G T A A C G T A C T G G T A C A G T C C G T A A C T G C T A G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

NKX6-1/MA0674.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTAATGCCAGGAA
TTAATTAN-----
 C G A T A C G T C G T A C G T A A C G T A C T G G T A C A G T C C G T A A C T G C T A G C G T A C G T A
C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTAATGCCAGGAA----
---TTTCCAGGAAATGG
 C G A T A C G T C G T A C G T A A C G T A C T G G T A C A G T C C G T A A C T G C T A G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTAATGCCAGGAA---
--NCTTCCNGGAAGNN
 C G A T A C G T C G T A C G T A A C G T A C T G G T A C A G T C C G T A A C T G C T A G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTAATGCCAGGAA---
--ATTTCCNGGAAATN
 C G A T A C G T C G T A C G T A A C G T A C T G G T A C A G T C C G T A A C T G C T A G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G

STAT1/MA0137.3/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTAATGCCAGGAA-
---TTTCCAGGAAA
 C G A T A C G T C G T A C G T A A C G T A C T G G T A C A G T C C G T A A C T G C T A G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TTAATGCCAGGAA---
------ACAGGAAGTG
 C G A T A C G T C G T A C G T A A C G T A C T G G T A C A G T C C G T A A C T G C T A G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTAATGCCAGGAA
TTAATTAN-----
 C G A T A C G T C G T A C G T A A C G T A C T G G T A C A G T C C G T A A C T G C T A G C G T A C G T A
C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTAATGCCAGGAA-
NNNCTTTCCAGGAAA
 A C G T C G A T A C G T C G T A C G T A A C G T A C T G G T A C A G T C C G T A A C T G C T A G C G T A C G T A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A