Information for 6-CTTACTAAAAATT (Motif 3)

A G T C A C G T C G A T C G T A A G T C C G A T C T G A C G T A C G T A C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T A C G T A C G T A C G T A G C T C G T A A C T G A C G T G C T A C G T A A C T G
p-value:1e-13
log p-value:-3.091e+01
Information Content per bp:1.932
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.7 +/- 26.7bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2D/MA0773.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTTACTAAAAATT--
---ACTATAAATAGA
 A G T C A C G T C G A T C G T A A G T C C G A T C T G A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTTACTAAAAATT--
---GCTATAAATAGC
 A G T C A C G T C G A T C G T A A G T C C G A T C T G A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTTACTAAAAATT--
ATTTACGACAAATAGC
 A C G T A G T C A C G T C G A T C G T A A G T C C G A T C T G A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTTACTAAAAATT--
---TCTAAAAATAGA
 A G T C A C G T C G A T C G T A A G T C C G A T C T G A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

BCL6B/MA0731.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTTACTAAAAATT--
TGCTTTCTAGGAATTCA
 A C G T A C G T A G T C A C G T C G A T C G T A A G T C C G A T C T G A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTACTAAAAATT---
-ATGCTAAAAATAGAA
 A G T C A C G T C G A T C G T A A G T C C G A T C T G A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTACTAAAAATT-
CCGTATTATAAACAA
 A C G T A G T C A C G T C G A T C G T A A G T C C G A T C T G A C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTTACTAAAAATT--
AATGCAATAAAATTTAT
 A C G T A C G T A G T C A C G T C G A T C G T A A G T C C G A T C T G A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTTACTAAAAATT--
---DCYAAAAATAGM
 A G T C A C G T C G A T C G T A A G T C C G A T C T G A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

PB0175.1_Sox4_2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTACTAAAAATT-----
-TNCNNAACAATTTTTNC
 A G T C A C G T C G A T C G T A A G T C C G A T C T G A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C