Information for 12-ATTATATTTTTAA (Motif 13)

T C G A A C G T C G A T T C G A A C G T C G T A C G A T A C G T A C G T A C G T C A G T C G T A C G T A
Reverse Opposite:
C G A T A C G T G C T A G T C A C G T A C G T A C G T A C G A T C G T A A C G T C G T A C G T A A C G T
p-value:1e-9
log p-value:-2.293e+01
Information Content per bp:1.815
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif37.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets34.9 +/- 28.2bp
Average Position of motif in Background48.9 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ATTATATTTTTAA---
-TTCTATTTTTAGNNN
 T C G A A C G T C G A T T C G A A C G T C G T A C G A T A C G T A C G T A C G T C A G T C G T A C G T A A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----ATTATATTTTTAA
NANTATTATAATTNNN-
 A C G T A C G T A C G T A C G T T C G A A C G T C G A T T C G A A C G T C G T A C G A T A C G T A C G T A C G T C A G T C G T A C G T A
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----ATTATATTTTTAA
NCGTATTATAATCNTA-
 A C G T A C G T A C G T A C G T T C G A A C G T C G A T T C G A A C G T C G T A C G A T A C G T A C G T A C G T C A G T C G T A C G T A
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----ATTATATTTTTAA
NNTAATTATAATTNNN-
 A C G T A C G T A C G T A C G T T C G A A C G T C G A T T C G A A C G T C G T A C G A T A C G T A C G T A C G T C A G T C G T A C G T A
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----ATTATATTTTTAA
NNTAATTATAATNANN-
 A C G T A C G T A C G T A C G T T C G A A C G T C G A T T C G A A C G T C G T A C G A T A C G T A C G T A C G T C A G T C G T A C G T A
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ATTATATTTTTAA-
--KCTATTTTTRGH
 T C G A A C G T C G A T T C G A A C G T C G T A C G A T A C G T A C G T A C G T C A G T C G T A C G T A A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATTATATTTTTAA-
--TCTATTTTTAGA
 T C G A A C G T C G A T T C G A A C G T C G T A C G A T A C G T A C G T A C G T C A G T C G T A C G T A A C G T
A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATTATATTTTTAA-
--GCTATTTTTAGC
 T C G A A C G T C G A T T C G A A C G T C G T A C G A T A C G T A C G T A C G T C A G T C G T A C G T A A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATTATATTTTTAA-
--TCTATTTATAGN
 T C G A A C G T C G A T T C G A A C G T C G T A C G A T A C G T A C G T A C G T C A G T C G T A C G T A A C G T
A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.63
Offset:6
Orientation:forward strand
Alignment:ATTATATTTTTAA--
------ATTTGAATT
 T C G A A C G T C G A T T C G A A C G T C G T A C G A T A C G T A C G T A C G T C A G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T