Information for 6-TGGGCTTTTTGGCTCC (Motif 12)

C G A T A C T G A C T G C T A G A G T C G A C T A C G T A C G T A G C T A C G T C T A G A C T G A T G C A C G T A T G C A G T C
Reverse Opposite:
T C A G A T C G C G T A A T C G G T A C G A T C C G T A T C G A G T C A T C G A C T G A C T A G A G T C A G T C G T A C G C T A
p-value:1e-10
log p-value:-2.338e+01
Information Content per bp:1.671
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif58.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets39.7 +/- 22.8bp
Average Position of motif in Background48.9 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:11
Orientation:forward strand
Alignment:TGGGCTTTTTGGCTCC-
-----------GCTCCG
 C G A T A C T G A C T G C T A G A G T C G A C T A C G T A C G T A G C T A C G T C T A G A C T G A T G C A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCC
----------NGCTN-
 C G A T A C T G A C T G C T A G A G T C G A C T A C G T A C G T A G C T A C G T C T A G A C T G A T G C A C G T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

RARA/MA0729.1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGGGCTTTTTGGCTCC
CATTGACCTTTTGACCTC-
 A C G T A C G T A C G T C G A T A C T G A C T G C T A G A G T C G A C T A C G T A C G T A G C T A C G T C T A G A C T G A T G C A C G T A T G C A G T C
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCC-----
----NNNNTTGGCGCCGANNN
 C G A T A C T G A C T G C T A G A G T C G A C T A C G T A C G T A G C T A C G T C T A G A C T G A T G C A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCC--
---WCATTTTGKCCTCYT
 C G A T A C T G A C T G C T A G A G T C G A C T A C G T A C G T A G C T A C G T C T A G A C T G A T G C A C G T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCC------
----------GGCTCYAKCAYC
 C G A T A C T G A C T G C T A G A G T C G A C T A C G T A C G T A G C T A C G T C T A G A C T G A T G C A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCC-----
----NNNNTTGGCGCCGANNN
 C G A T A C T G A C T G C T A G A G T C G A C T A C G T A C G T A G C T A C G T C T A G A C T G A T G C A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TGGGCTTTTTGGCTCC
NNATTGGACTTTNGNN----
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G C T A G A G T C G A C T A C G T A C G T A G C T A C G T C T A G A C T G A T G C A C G T A T G C A G T C
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGGGCTTTTTGGCTCC
TTGACCTTTTGACCTT-
 A C G T C G A T A C T G A C T G C T A G A G T C G A C T A C G T A C G T A G C T A C G T C T A G A C T G A T G C A C G T A T G C A G T C
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:TGGGCTTTTTGGCTCC---
-------TTTGGCGCCAAA
 C G A T A C T G A C T G C T A G A G T C G A C T A C G T A C G T A G C T A C G T C T A G A C T G A T G C A C G T A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A