Information for 5-GGGCACTGCGGGT (Motif 8)

A C T G A C T G A C T G G T A C C G T A A G T C A G C T A C T G A G T C A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A C T G A G T C C T G A A C T G A C G T A C T G A G T C A G T C A G T C
p-value:1e-11
log p-value:-2.637e+01
Information Content per bp:1.907
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 18.2bp
Average Position of motif in Background29.3 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGGCACTGCGGGT----
-NNNNATGCGGGTNNNN
 A C T G A C T G A C T G G T A C C G T A A G T C A G C T A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGGCACTGCGGGT-
----TATGCGGGTA
 A C T G A C T G A C T G G T A C C G T A A G T C A G C T A C T G A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGGCACTGCGGGT--
----CATGCGGGTAC
 A C T G A C T G A C T G G T A C C G T A A G T C A G C T A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGCACTGCGGGT-
NNGCNCTGCGCGGC
 A C T G A C T G A C T G G T A C C G T A A G T C A G C T A C T G A G T C A C T G A C T G A C T G A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGGCACTGCGGGT
--DCTCAGCAGG-
 A C T G A C T G A C T G G T A C C G T A A G T C A G C T A C T G A G T C A C T G A C T G A C T G A C G T
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGGCACTGCGGGT----
--DCHCAGCAGGRGGCC
 A C T G A C T G A C T G G T A C C G T A A G T C A G C T A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGGCACTGCGGGT----
--NCNCAGCGGGGGGTC
 A C T G A C T G A C T G G T A C C G T A A G T C A G C T A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGGCACTGCGGGT----
--NCGCAGCGGGGGGTC
 A C T G A C T G A C T G G T A C C G T A A G T C A G C T A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GGGCACTGCGGGT
NNNNTTGGGCACNNCN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G G T A C C G T A A G T C A G C T A C T G A G T C A C T G A C T G A C T G A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGGCACTGCGGGT-
-----TTGCGGTTT
 A C T G A C T G A C T G G T A C C G T A A G T C A G C T A C T G A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T