Information for 8-TAAGCGACTTAGA (Motif 11)

C G A T C G T A C T G A A C T G T A G C A T C G C G T A A G T C A C G T A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C C G A T C G T A C G T A A C T G A C G T A T G C A T C G A G T C A G C T C G A T C G T A
p-value:1e-10
log p-value:-2.473e+01
Information Content per bp:1.851
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.0 +/- 11.8bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TAAGCGACTTAGA----
-ATTGGACTTTGACCCC
 C G A T C G T A C T G A A C T G T A G C A T C G C G T A A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAAGCGACTTAGA---
CTTAACCACTTAAGGAT
 A C G T C G A T C G T A C T G A A C T G T A G C A T C G C G T A A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TAAGCGACTTAGA
---ACCACTTAA-
 C G A T C G T A C T G A A C T G T A G C A T C G C G T A A G T C A C G T A C G T C G T A A C T G C G T A
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAAGCGACTTAGA---
TAAGCCACTTAACATT
 C G A T C G T A C T G A A C T G T A G C A T C G C G T A A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAAGCGACTTAGA---
TAAGCCACTTGAATTT
 C G A T C G T A C T G A A C T G T A G C A T C G C G T A A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TAAGCGACTTAGA
--AAGCACTTAA-
 C G A T C G T A C T G A A C T G T A G C A T C G C G T A A G T C A C G T A C G T C G T A A C T G C G T A
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TAAGCGACTTAGA
---ACCACTTAA-
 C G A T C G T A C T G A A C T G T A G C A T C G C G T A A G T C A C G T A C G T C G T A A C T G C G T A
A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAAGCGACTTAGA---
CATAACCACTTAACAAC
 A C G T C G A T C G T A C T G A A C T G T A G C A T C G C G T A A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Crx/MA0467.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TAAGCGACTTAGA
-AAGAGGATTAG-
 C G A T C G T A C T G A A C T G T A G C A T C G C G T A A G T C A C G T A C G T C G T A A C T G C G T A
A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TAAGCGACTTAGA---
------CCTTTGATGT
 C G A T C G T A C T G A A C T G T A G C A T C G C G T A A G T C A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T