Information for 20-GAAGGAGGGAAGG (Motif 19)

A C T G G T C A C T G A A C T G A C T G C G T A C T A G A C T G A C T G C T G A C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C A C G T A G C T A G T C A G T C A G T C A C G T A G T C A G T C A G C T A C G T A G T C
p-value:1e-8
log p-value:-1.954e+01
Information Content per bp:1.904
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.6 +/- 28.1bp
Average Position of motif in Background49.6 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GAAGGAGGGAAGG----
GGAAGGAAGGAAGGAAGG
 A C G T A C T G G T C A C T G A A C T G A C T G C G T A C T A G A C T G A C T G C T G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GAAGGAGGGAAGG
--GGGCGGGAAGG
 A C T G G T C A C T G A A C T G A C T G C G T A C T A G A C T G A C T G C T G A C G T A A C T G A C T G
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GAAGGAGGGAAGG
---GGCGGGAARN
 A C T G G T C A C T G A A C T G A C T G C G T A C T A G A C T G A C T G C T G A C G T A A C T G A C T G
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAAGGAGGGAAGG
-CWGGCGGGAA--
 A C T G G T C A C T G A A C T G A C T G C G T A C T A G A C T G A C T G C T G A C G T A A C T G A C T G
A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAGGAGGGAAGG--------
GGAGGAGGAGGGGGAGGAGGA
 A C T G G T C A C T G A A C T G A C T G C G T A C T A G A C T G A C T G C T G A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAAGGAGGGAAGG
--GGGCGGGAAGG
 A C T G G T C A C T G A A C T G A C T G C G T A C T A G A C T G A C T G C T G A C G T A A C T G A C T G
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAGGAGGGAAGG
BTKGGCGGGAAA-
 A C T G G T C A C T G A A C T G A C T G C G T A C T A G A C T G A C T G C T G A C G T A A C T G A C T G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAAGGAGGGAAGG
GGGGGCGGGGC--
 A C T G G T C A C T G A A C T G A C T G C G T A C T A G A C T G A C T G C T G A C G T A A C T G A C T G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GAAGGAGGGAAGG---
----TGGGGAAGGGCM
 A C T G G T C A C T G A A C T G A C T G C G T A C T A G A C T G A C T G C T G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAAGGAGGGAAGG-
--TGGCGGGAAAHB
 A C T G G T C A C T G A A C T G A C T G C G T A C T A G A C T G A C T G C T G A C G T A A C T G A C T G A C G T
A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G