Information for 5-GGTGAGAGGCAGCTGC (Motif 6)

A C T G A C T G C A G T T A C G C T G A A T C G C T G A C A T G C T A G T G A C G C T A C T A G G A T C A C G T A T C G A G T C
Reverse Opposite:
T A C G A T G C T C G A C T A G A G T C C G A T A C T G A G T C G T A C A G C T T A G C G A C T A T G C G T C A T G A C A G T C
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.641
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif81.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets41.3 +/- 23.1bp
Average Position of motif in Background52.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GGTGAGAGGCAGCTGC-
----NGNGACAGCTGCN
 A C T G A C T G C A G T T A C G C T G A A T C G C T G A C A T G C T A G T G A C G C T A C T A G G A T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GGTGAGAGGCAGCTGC-
-----NNAGCAGCTGCT
 A C T G A C T G C A G T T A C G C T G A A T C G C T G A C A T G C T A G T G A C G C T A C T A G G A T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:GGTGAGAGGCAGCTGC-
-------CGCAGCTGCG
 A C T G A C T G C A G T T A C G C T G A A T C G C T G A C A T G C T A G T G A C G C T A C T A G G A T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:GGTGAGAGGCAGCTGC-
-------AGCAGCTGCT
 A C T G A C T G C A G T T A C G C T G A A T C G C T G A C A T G C T A G T G A C G C T A C T A G G A T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.66
Offset:7
Orientation:forward strand
Alignment:GGTGAGAGGCAGCTGC--
-------GACAGCTGCAG
 A C T G A C T G C A G T T A C G C T G A A T C G C T G A C A T G C T A G T G A C G C T A C T A G G A T C A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.66
Offset:6
Orientation:forward strand
Alignment:GGTGAGAGGCAGCTGC
------NNACAGCTGC
 A C T G A C T G C A G T T A C G C T G A A T C G C T G A C A T G C T A G T G A C G C T A C T A G G A T C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.64
Offset:7
Orientation:forward strand
Alignment:GGTGAGAGGCAGCTGC--
-------AACAGCTGCAG
 A C T G A C T G C A G T T A C G C T G A A T C G C T G A C A T G C T A G T G A C G C T A C T A G G A T C A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.64
Offset:8
Orientation:forward strand
Alignment:GGTGAGAGGCAGCTGC--
--------NCAGCTGCTG
 A C T G A C T G C A G T T A C G C T G A A T C G C T G A C A T G C T A G T G A C G C T A C T A G G A T C A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGTGAGAGGCAGCTGC----
---NNNNAGCAGCTGCTGAN
 A C T G A C T G C A G T T A C G C T G A A T C G C T G A C A T G C T A G T G A C G C T A C T A G G A T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GGTGAGAGGCAGCTGC-
-----NNVVCAGCTGBN
 A C T G A C T G C A G T T A C G C T G A A T C G C T G A C A T G C T A G T G A C G C T A C T A G G A T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T