Information for 9-GAAATTGCTA (Motif 14)

A T C G C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A T G C
p-value:1e-7
log p-value:-1.717e+01
Information Content per bp:1.908
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif29.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets61.4 +/- 25.9bp
Average Position of motif in Background48.1 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAAATTGCTA----
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A T C G C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T C G T A A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAAATTGCTA----
AAAATTGTTATGAA
 A T C G C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAAATTGCTA--
GAAAAAATTGCAAGG
 A C G T A C G T A C G T A T C G C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T C G T A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

ONECUT1/MA0679.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAATTGCTA--
AAAAAATCGATAAT
 A C G T A C G T A T C G C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T C G T A A C G T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

PH0007.1_Barx1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAAATTGCTA---
AAAGTAATTAGTGAAT
 A C G T A C G T A C G T A T C G C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T C G T A A C G T A C G T A C G T
G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

ONECUT2/MA0756.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAAATTGCTA--
AAAAAATCGATAAT
 A C G T A C G T A T C G C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T C G T A A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAAATTGCTA
---ATTGTTA
 A T C G C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T C G T A
A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAAATTGCTA
GGAAATTCCC-
 A C G T A T C G C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T C G T A
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

Sox11/MA0869.1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GAAATTGCTA
AACACTGAAATTGTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T C G T A
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAAATTGCTA--
GAAACTGAAACT
 A T C G C G T A C G T A C G T A A C G T C G A T C T A G G T A C A C G T C G T A A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T