p-value: | 1e-9 |
log p-value: | -2.181e+01 |
Information Content per bp: | 1.921 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.77% |
Number of Background Sequences with motif | 5.3 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 43.7 +/- 28.4bp |
Average Position of motif in Background | 55.2 +/- 37.8bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGYCAWTGCCCTG AGGTCANTGACCTN |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGYCAWTGCCCTG TGACCTTGACCT- |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TGYCAWTGCCCTG--- ------TGCCCAGNHW |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGYCAWTGCCCTG TGACCTTGACCT- |
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MEIS1/MA0498.2/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGYCAWTGCCCTG NTGTCAN------- |
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MEIS3/MA0775.1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGYCAWTGCCCTG CCTGTCAA------- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TGYCAWTGCCCTG- ------TGACCTYA |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGYCAWTGCCCTG TGTCANYT----- |
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HIC2/MA0738.1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TGYCAWTGCCCTG- -----ATGCCCACC |
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Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGYCAWTGCCCTG YTGWCADY------ |
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