Information for 3-CTGGCCGATAGGTGGC (Motif 7)

T G A C C A G T C A T G A C T G A G T C A G T C C T A G T G C A C A G T C G T A C T A G C T A G A C G T A C T G T A C G A G T C
Reverse Opposite:
T C A G A G T C A G T C T C G A A G T C A G T C A C G T G T C A A C G T A G T C C T A G C T A G A G T C G A T C G T C A A C T G
p-value:1e-12
log p-value:-2.772e+01
Information Content per bp:1.717
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.9 +/- 19.0bp
Average Position of motif in Background57.0 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTGGCCGATAGGTGGC----
-TGGCCACCAGGGGGCGCTA
 T G A C C A G T C A T G A C T G A G T C A G T C C T A G T G C A C A G T C G T A C T A G C T A G A C G T A C T G T A C G A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGGCCGATAGGTGGC-----
-TGGCCACCAGGTGGCACTNT
 T G A C C A G T C A T G A C T G A G T C A G T C C T A G T G C A C A G T C G T A C T A G C T A G A C G T A C T G T A C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTGGCCGATAGGTGGC-------
---GCCASCAGGGGGCGCYVNNG
 T G A C C A G T C A T G A C T G A G T C A G T C C T A G T G C A C A G T C G T A C T A G C T A G A C G T A C T G T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTGGCCGATAGGTGGC---
--TGCGCATAGGGGAGGAG
 T G A C C A G T C A T G A C T G A G T C A G T C C T A G T G C A C A G T C G T A C T A G C T A G A C G T A C T G T A C G A G T C A C G T A C G T A C G T
A C G T A C G T C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.55
Offset:9
Orientation:forward strand
Alignment:CTGGCCGATAGGTGGC-
---------AGGTGTCA
 T G A C C A G T C A T G A C T G A G T C A G T C C T A G T G C A C A G T C G T A C T A G C T A G A C G T A C T G T A C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGGCCGATAGGTGGC
--AGCCAATCGG----
 T G A C C A G T C A T G A C T G A G T C A G T C C T A G T G C A C A G T C G T A C T A G C T A G A C G T A C T G T A C G A G T C
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTGGCCGATAGGTGGC-----
-----GCGGAGGTGTCGCCTC
 T G A C C A G T C A T G A C T G A G T C A G T C C T A G T G C A C A G T C G T A C T A G C T A G A C G T A C T G T A C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CTGGCCGATAGGTGGC
------AACAGGTGT-
 T G A C C A G T C A T G A C T G A G T C A G T C C T A G T G C A C A G T C G T A C T A G C T A G A C G T A C T G T A C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CTGGCCGATAGGTGGC
------GACAGGTGTN
 T G A C C A G T C A T G A C T G A G T C A G T C C T A G T G C A C A G T C G T A C T A G C T A G A C G T A C T G T A C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CTGGCCGATAGGTGGC
------AACAGGTGNT
 T G A C C A G T C A T G A C T G A G T C A G T C C T A G T G C A C A G T C G T A C T A G C T A G A C G T A C T G T A C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T