Information for 11-CGGTGTACAC (Motif 12)

A T G C A C T G A C T G A C G T A C T G G C A T C G T A G T A C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T C G T A A G T C C G T A A G T C G T A C A T C G
p-value:1e-6
log p-value:-1.468e+01
Information Content per bp:1.884
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif27.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets26.3 +/- 18.2bp
Average Position of motif in Background55.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CGGTGTACAC---
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C T G G C A T C G T A G T A C C G T A A G T C A C G T A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGGTGTACAC----
TACATGTGCACATAAAA
 A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C T G G C A T C G T A G T A C C G T A A G T C A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGTACAC-----
NNTTTGCACACGGCCC
 A C G T A T G C A C T G A C T G A C G T A C T G G C A T C G T A G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGGTGTACAC----
CAGATGTGCACATACGT
 A C G T A C G T A C G T A T G C A C T G A C T G A C G T A C T G G C A T C G T A G T A C C G T A A G T C A C G T A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGGTGTACAC-
---DGTAAACA
 A T G C A C T G A C T G A C G T A C T G G C A T C G T A G T A C C G T A A G T C A C G T
A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGTACAC-
NCTAAGTAAACA
 A C G T A T G C A C T G A C T G A C G T A C T G G C A T C G T A G T A C C G T A A G T C A C G T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGTGTACAC-
-TGTCTAGACG
 A T G C A C T G A C T G A C G T A C T G G C A T C G T A G T A C C G T A A G T C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGGTGTACAC-----
CAAAGTAAACANNNN
 A T G C A C T G A C T G A C G T A C T G G C A T C G T A G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGTGTACAC---
-TATGTAAACANG
 A T G C A C T G A C T G A C G T A C T G G C A T C G T A G T A C C G T A A G T C A C G T A C G T A C G T
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGTGTACAC---
--AAGTAAACAAA
 A T G C A C T G A C T G A C G T A C T G G C A T C G T A G T A C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A