p-value: | 1e-8 |
log p-value: | -1.891e+01 |
Information Content per bp: | 1.715 |
Number of Target Sequences with motif | 17.0 |
Percentage of Target Sequences with motif | 2.17% |
Number of Background Sequences with motif | 170.2 |
Percentage of Background Sequences with motif | 0.35% |
Average Position of motif in Targets | 52.5 +/- 27.7bp |
Average Position of motif in Background | 45.8 +/- 31.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.18 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCGCCGTCTA- -VBSYGTCTGG |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCGCCGTCTA- ---CTGTCTGG |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCGCCGTCTA --GCTGTCAA |
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SMAD3/MA0795.1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCGCCGTCTA---- ----CGTCTAGACA |
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POL006.1_BREu/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCGCCGTCTA GGCGCGCT--- |
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MEIS3/MA0775.1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCGCCGTCTA --CCTGTCAA |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCGCCGTCTA------ NNTNNTGTCTGGNNTNG |
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PB0009.1_E2F3_1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GCGCCGTCTA ANCGCGCGCCCTTNN |
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BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GCGCCGTCTA----- CNNBRGCGCCCCCTGSTGGC |
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PB0008.1_E2F2_1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GCGCCGTCTA NTCGCGCGCCTTNNN |
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