Information for 8-CAAAACCACA (Motif 8)

A G T C G T C A T G C A G T C A C G T A A G T C A G T C C G T A A G T C C G T A
Reverse Opposite:
C G A T A C T G A C G T C T A G A C T G A C G T A C G T A C G T A C G T A C T G
p-value:1e-12
log p-value:-2.841e+01
Information Content per bp:1.912
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif101.3
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets43.0 +/- 24.0bp
Average Position of motif in Background49.0 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.86
Offset:2
Orientation:forward strand
Alignment:CAAAACCACA--
--AAACCACANN
 A G T C G T C A T G C A G T C A C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.84
Offset:1
Orientation:forward strand
Alignment:CAAAACCACA---
-NWAACCACADNN
 A G T C G T C A T G C A G T C A C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.83
Offset:1
Orientation:forward strand
Alignment:CAAAACCACA-
-NAAACCACAG
 A G T C G T C A T G C A G T C A C G T A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:CAAAACCACA---
--AAACCACAGAN
 A G T C G T C A T G C A G T C A C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:CAAAACCACA--
--AAACCACAGC
 A G T C G T C A T G C A G T C A C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CAAAACCACA--
--AAACCGCAAA
 A G T C G T C A T G C A G T C A C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CAAAACCACA-
--AAACCGCAA
 A G T C G T C A T G C A G T C A C G T A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAAAACCACA--
SSAATCCACANN
 A G T C G T C A T G C A G T C A C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAAAACCACA
TCCAATCCACA
 A C G T A G T C G T C A T G C A G T C A C G T A A G T C A G T C C G T A A G T C C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CAAAACCACA--
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T A G T C G T C A T G C A G T C A C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A