Information for 16-CTTAATTGGGTCCCCA (Motif 34)

A T G C A C G T A C G T G T C A C G T A A C G T C G A T A C T G A C T G A C T G A C G T A G T C A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G C T A G A C T G A C T G G T C A A G T C A G T C A G T C C G T A G T C A A C G T A C G T G T C A C G T A A T C G
p-value:1e-6
log p-value:-1.448e+01
Information Content per bp:1.915
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 31.3bp
Average Position of motif in Background37.8 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX2/MA0708.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTAATTGGGTCCCCA
-NTAATTGG-------
 A T G C A C G T A C G T G T C A C G T A A C G T C G A T A C T G A C T G A C T G A C G T A G T C A G T C A G T C A G T C C G T A
A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTTAATTGGGTCCCCA
NNNNGTTGATTGGGTCG---
 A C G T A C G T A C G T A C G T A T G C A C G T A C G T G T C A C G T A A C G T C G A T A C T G A C T G A C T G A C G T A G T C A G T C A G T C A G T C C G T A
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTTAATTGGGTCCCCA
-NTAATTGG-------
 A T G C A C G T A C G T G T C A C G T A A C G T C G A T A C T G A C T G A C T G A C G T A G T C A G T C A G T C A G T C C G T A
A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTTAATTGGGTCCCCA
-NTAATTGN-------
 A T G C A C G T A C G T G T C A C G T A A C G T C G A T A C T G A C T G A C T G A C G T A G T C A G T C A G T C A G T C C G T A
A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LBX2/MA0699.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTAATTGGGTCCCCA
NNTAATTGGN------
 A T G C A C G T A C G T G T C A C G T A A C G T C G A T A C T G A C T G A C T G A C G T A G T C A G T C A G T C A G T C C G T A
A T C G G A T C G C A T T G C A T G C A A C G T A C G T C T A G T C A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

EN2/MA0642.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTAATTGGGTCCCCA
GNTAATTGGN------
 A T G C A C G T A C G T G T C A C G T A A C G T C G A T A C T G A C T G A C T G A C G T A G T C A G T C A G T C A G T C C G T A
T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.58
Offset:10
Orientation:reverse strand
Alignment:CTTAATTGGGTCCCCA
----------TCCCCA
 A T G C A C G T A C G T G T C A C G T A A C G T C G A T A C T G A C T G A C T G A C G T A G T C A G T C A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

Shox2/MA0720.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTAATTGGGTCCCCA
-NTAATTAG-------
 A T G C A C G T A C G T G T C A C G T A A C G T C G A T A C T G A C T G A C T G A C G T A G T C A G T C A G T C A G T C C G T A
A C G T A G C T C G A T G T C A C G T A C A G T C G A T C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Prrx2/MA0075.2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTAATTGGGTCCCCA
-NTAATTGN-------
 A T G C A C G T A C G T G T C A C G T A A C G T C G A T A C T G A C T G A C T G A C G T A G T C A G T C A G T C A G T C C G T A
A C G T A G C T C G A T C T G A C T G A A C G T A G C T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAX2/MA0717.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTAATTGGGTCCCCA
-NTAATTGG-------
 A T G C A C G T A C G T G T C A C G T A A C G T C G A T A C T G A C T G A C T G A C G T A G T C A G T C A G T C A G T C C G T A
A C G T A G C T C G A T T C G A C T G A C A G T A G C T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T