Information for 18-VTGGGCAACCGCA (Motif 28)

T A C G C G A T C A T G C A T G T C A G T G A C G T C A C T G A T A G C G T A C C T A G T A G C G C T A
Reverse Opposite:
C G A T A T C G G A T C C A T G A T C G G A C T C A G T A C T G A G T C G T A C G T A C G C T A A T G C
p-value:1e-7
log p-value:-1.733e+01
Information Content per bp:1.411
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 24.7bp
Average Position of motif in Background55.7 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----VTGGGCAACCGCA
NNNNTTGGGCACNNCN-
 A C G T A C G T A C G T A C G T T A C G C G A T C A T G C A T G T C A G T G A C G T C A C T G A T A G C G T A C C T A G T A G C G C T A
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-VTGGGCAACCGCA
NGTGGGCAT-----
 A C G T T A C G C G A T C A T G C A T G T C A G T G A C G T C A C T G A T A G C G T A C C T A G T A G C G C T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---VTGGGCAACCGCA
WDNCTGGGCA------
 A C G T A C G T A C G T T A C G C G A T C A T G C A T G T C A G T G A C G T C A C T G A T A G C G T A C C T A G T A G C G C T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-VTGGGCAACCGCA
TNNGGGCAG-----
 A C G T T A C G C G A T C A T G C A T G T C A G T G A C G T C A C T G A T A G C G T A C C T A G T A G C G C T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-VTGGGCAACCGCA
CSTGGGAAAD----
 A C G T T A C G C G A T C A T G C A T G T C A G T G A C G T C A C T G A T A G C G T A C C T A G T A G C G C T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-VTGGGCAACCGCA
NNTTGGCANN----
 A C G T T A C G C G A T C A T G C A T G T C A G T G A C G T C A C T G A T A G C G T A C C T A G T A G C G C T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:VTGGGCAACCGCA-
-----AAACCGCAA
 T A C G C G A T C A T G C A T G T C A G T G A C G T C A C T G A T A G C G T A C C T A G T A G C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:VTGGGCAACCGCA
-TGCGCAGGCGC-
 T A C G C G A T C A T G C A T G T C A G T G A C G T C A C T G A T A G C G T A C C T A G T A G C G C T A
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:VTGGGCAACCGCA--
-----AAACCGCAAA
 T A C G C G A T C A T G C A T G T C A G T G A C G T C A C T G A T A G C G T A C C T A G T A G C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-VTGGGCAACCGCA
ATTGCGCAAC----
 A C G T T A C G C G A T C A T G C A T G T C A G T G A C G T C A C T G A T A G C G T A C C T A G T A G C G C T A
T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T A C G T A C G T A C G T